Shewanella sediminis: Ssed_2618
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Entry
Ssed_2618 CDS
T00596
Name
(GenBank) Cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
sse
Shewanella sediminis
Pathway
sse00240
Pyrimidine metabolism
sse01100
Metabolic pathways
sse01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ssed_2618
Enzymes [BR:
sse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
Ssed_2618
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Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
ABV37225
UniProt:
A8FWK2
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Position
3171260..3172150
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AA seq
296 aa
AA seq
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MQDRFIKCIAELPKPLSDALVPMLNAEFAGHIDAQQLSTLITKSGLAESELLIALLPVAA
ALARPPISEFYVGAIAKGKSGDIYMGANMELSGEALFHSVHAEQSAISHAWLSGERQIED
VIVNFSPCGHCRQFMNELVEGQKVKIHLPEQQTQPLSHYLPYAFGPSDLNITEPLLTKQQ
HELSLDSSDPMIIEALDHASLSYAPYTNSYAAVVLETQDGATYCGRYAENAAFNPSMLPM
QMALSTMARHNREFCEISRAVLIESAGGKISLVGATMDALHAVAAVELEHIVLDPE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagatttataaagtgcatcgcagagttgcccaaaccactatcagatgcattg
gtacccatgttgaatgccgagtttgccggccatatcgatgcccagcaacttagcacgctt
atcaccaagagtggattagcagagagcgagcttctgatcgctttgcttcctgttgccgcg
gcactggccagaccgcctatcagtgagttttatgtcggtgccattgccaaaggtaagagt
ggtgatatctacatgggtgcaaatatggagctctcaggtgaggcactattccattcggtg
catgcagagcagagtgccatcagtcatgcatggctgagcggtgaacgtcaaattgaagat
gtcatcgttaatttctcaccatgtggtcattgtcgccaatttatgaacgaactggtcgaa
ggtcagaaggtgaaaatccaccttcctgagcagcaaactcaacctctgtcacactatctg
ccctatgcctttggcccgagcgatctgaacatcactgagcccctgctaacgaaacagcag
catgagcttagtctggacagctcagatcctatgatcatcgaggctctggatcatgcaagc
ttaagctacgccccttataccaatagctatgccgctgttgtcctggagacacaagatggt
gcgacctattgtggccgatatgctgaaaatgcggcatttaacccctctatgttacccatg
cagatggcgctttctaccatggccagacataacagagagttctgtgagatctctcgtgcg
gtacttatcgagtcagcgggtggaaaaatctctctggttggcgcgacgatggatgccctt
cacgccgttgctgcggtagagcttgaacatatcgtcctcgacccagagtaa
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