Shewanella sediminis: Ssed_3247
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Entry
Ssed_3247 CDS
T00596
Name
(GenBank) sensor histidine kinase with ATPase domain
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
sse
Shewanella sediminis
Pathway
sse01503
Cationic antimicrobial peptide (CAMP) resistance
sse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ssed_3247
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_3247
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sse01001
]
Ssed_3247
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_3247
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_3247
Enzymes [BR:
sse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ssed_3247
Protein kinases [BR:
sse01001
]
Histidine kinases
OmpR family
Ssed_3247
Two-component system [BR:
sse02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Ssed_3247
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Ssed_3247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HATPase_c_5
HATPase_c_2
HATPase_c_3
HisKA
Motif
Other DBs
NCBI-ProteinID:
ABV37851
UniProt:
A8FYC8
LinkDB
All DBs
Position
3940377..3941786
Genome browser
AA seq
469 aa
AA seq
DB search
MSKPSSQSQSETGVNPNKGLLNSLKARLVVSALLLILVLLPLIGFTLNDAFKQQVKSAAK
NELSAYLYSVLAVTEVDNNRLLMPELLVENQFNVIQSGLYALISTPGNTSGIPAKHLLWQ
SNSFLASEPPQHLPHPATGQSEFGEILLEGKPHIIYSFSASFEQRQNKQFPITIHIIKDQ
ADFQLQIDKFTRQLWTWLLILMALLGGVQLAWLLWTLKPLAKFKQELSDVEQGRAMQLEA
DYPTELQAVARQLNTLLNTEQSQRKRYRNALSDLAHSLKTPLAVIQSQKDLSQGSFEQIS
VINRIIGHQLKRAQSAAGSSWHLGVKVCSVSEKLVRTLGKIYRAPEIQITESVDSEAIFK
GDESDLTEILGNLLDNACKAAKSKVLLSVTSSDTQLNIAIEDDGNGISPEQQSQIFERGI
RADSYSQGHGIGLAIVRDLIDSYNGKLSVSTSESLGGAKFEISFSLGRR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgtcctctcaatctcaatcggagaccggagttaaccctaataagggcctg
cttaactccctcaaggccagactggttgtcagtgccctgctgttgatcttagtcctgctg
cccctgattggtttcactcttaacgacgccttcaagcaacaggtgaaaagcgccgctaaa
aacgaactcagcgcttacctctattcagtgttagcggtcaccgaagtcgacaataaccgt
ttactcatgccagagctattggtggaaaatcaatttaacgtcattcaatccggcttatat
gctctgatatcgacacctggtaacacatcgggaataccagctaaacatctgctgtggcaa
tcaaactcctttctagcgtctgaaccgcctcaacacttgccccatccggcaacgggtcag
agtgagtttggcgaaatactgctcgaaggtaaaccccatattatctacagcttcagcgcc
agtttcgagcagaggcaaaataagcagttccccatcacgattcatatcatcaaagatcag
gccgactttcagctgcagatagataaatttacccgccaactctggacctggttactgatc
ttaatggcactcttgggcggcgtgcagctggcttggttgctctggaccttgaagccctta
gctaagtttaaacaggaactcagtgatgtcgaacaaggccgtgccatgcagctcgaggca
gactacccaacagagttgcaagccgtggcgcgccagcttaatacattactcaatactgaa
caaagccagcgcaaaaggtaccgaaatgccctgtccgatctggcccatagcctgaaaacg
cccttagccgtgatccagagtcaaaaagatctcagtcagggctcctttgagcagataagc
gtgatcaatagaatcattggccatcaactcaagcgcgcccaaagcgcggccggctcttcg
tggcacttaggggttaaggtctgttcagtcagtgaaaaactcgtcagaaccttagggaaa
atctaccgagcccccgagatacagatcaccgaatctgtcgatagtgaggccatctttaag
ggcgatgagtccgacctgaccgagatactgggtaatctgctcgataatgcctgcaaagcg
gcgaagtcaaaggtgttattaagcgtcacctcgagtgacactcagttaaatatagcgata
gaagatgacggtaatgggataagtcccgagcaacagagccagatattcgagaggggcatt
cgcgccgactcatacagccaaggtcacggaataggccttgccatcgtgcgcgatcttatc
gacagctataatggcaagctttcagtgtccacttcagaaagtctcggcggcgctaaattt
gagataagcttcagccttgggagaaggtaa
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