Shewanella sediminis: Ssed_3393
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Entry
Ssed_3393 CDS
T00596
Name
(GenBank) Triose-phosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
sse
Shewanella sediminis
Pathway
sse00010
Glycolysis / Gluconeogenesis
sse00051
Fructose and mannose metabolism
sse00562
Inositol phosphate metabolism
sse00710
Carbon fixation by Calvin cycle
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
sse01230
Biosynthesis of amino acids
Module
sse_M00002
Glycolysis, core module involving three-carbon compounds
sse_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Ssed_3393
00051 Fructose and mannose metabolism
Ssed_3393
00562 Inositol phosphate metabolism
Ssed_3393
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Ssed_3393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sse04147
]
Ssed_3393
Enzymes [BR:
sse01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
Ssed_3393
Exosome [BR:
sse04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
Ssed_3393
Exosomal proteins of bladder cancer cells
Ssed_3393
Exosomal proteins of melanoma cells
Ssed_3393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
DUF6214
Motif
Other DBs
NCBI-ProteinID:
ABV37997
UniProt:
A8FYS4
LinkDB
All DBs
Position
complement(4135305..4136087)
Genome browser
AA seq
260 aa
AA seq
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MALRRPMVAGNWKMNGSAQLALELFNKFATKLQDDSAEVVLCPPSIYLESVRQQLDANKD
ALNGCLVRMGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEK
FAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAV
GTGKSATPEQAQEVHAFIRKRLSEVSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGLI
GGVSLNSTEFLSLCSIAMSA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagacgtccaatggtcgctggtaactggaaaatgaatggcagtgcgcaatta
gcgctggagttattcaataaattcgctactaagcttcaagatgattcagcggaagtggtc
ttatgcccaccaagcatatatctagaaagtgtacgtcagcagttagacgctaataaagac
gctttaaatggttgtcttgtcagaatgggcgcacaaaacctgagtcaacatgacttcggt
gcttatactggtgaagtgtcagggcagatgttaaaggattcaggatgccgatatgttatt
atcggacactccgaacgtcgccgtatgtacggagagacgagtgatatcgttgctgagaag
tttgcagcagcacaaaaacatggtttgaccccaatactttgtgttggtgagtccggtcca
gctagagaagcgagaagaacttttgaagttatcgccgaagagttagatgtggtcattgaa
aaaaatggcaccatggcatttgataacgcgattatcgcctatgagcctttatgggctgta
ggaaccggtaagagtgctacgccagagcaggcacaggaagttcatgcgtttatacgcaaa
cgcctctctgaagtgtctccatatattggagaaaatatcaggattttgtacggtggtagc
gtaacaccgagtaatgctgcagatctatttgcacaacctgatgtagatggtggattgatt
ggcggtgtgagcttaaactctaccgagtttctaagtttatgttccatagcgatgagcgca
taa
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