Sphingomonas sediminicola: H9L14_01690
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Entry
H9L14_01690 CDS
T07077
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ssed
Sphingomonas sediminicola
Pathway
ssed01501
beta-Lactam resistance
ssed01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9L14_01690
01503 Cationic antimicrobial peptide (CAMP) resistance
H9L14_01690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssed02000
]
H9L14_01690
01504 Antimicrobial resistance genes [BR:
ssed01504
]
H9L14_01690
Transporters [BR:
ssed02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H9L14_01690
Antimicrobial resistance genes [BR:
ssed01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H9L14_01690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
OppC_N
Motif
Other DBs
NCBI-ProteinID:
QNP46022
LinkDB
All DBs
Position
complement(300912..304310)
Genome browser
AA seq
1132 aa
AA seq
DB search
MNFRNISSWCIRNPVFPIVLFVGLMLAGLISFYQMQVNNAPDIDFPAATVSVSQPGAAPN
EIETQITQRVESAIRGVNGVEEINSSVREGNSFTFVQFEIGTPTDRAVNDVRNAIAQIRG
NLPEGILEPQITRVDAEDQPIMFVGAETTDMTLEQLSWYIDNTVSKRLLGIEGIAAVSRS
GGVDRTIRVILDPAALQSQGITAAQVNQQLRQSNLNAAGGRAEVAGSEQSVRVLGNARNA
YELSQTQITLPGGRWVRLADLGEVRDSSSEQRSIAKMNGRQVVTFAVQRAKGSSEVTAYE
AGWAEVRKLEKENPKVRFSEIFNTVDYTKAQYRSAMEGLWEGAVLAVLVVFLFLRDIRAT
IISALAIPMSAIPAFWFMSMLGITLNFMSTMAMGLVAGVLVDDAIVEIENIVRHMRMGKS
GYQAALDAADEIGLAVLATTMAIVAVFFPVALMPGIAGQYFKAFGFTVVMSVLMSLLVAR
MITPLVAAYFLRSHGVQDHANWKWMDLYLKVLNWSLDTSKADALLARLPKAARNPGYYLL
GALLLLLVIGAFVAGTGAGMFGLGKLAWNGGVTFVLALGVGTLVAYGAGKLIGFLVGMMG
SHGFAQWHSTIAARWNARLHDHRLAMVGAGIGTLLMSIILFGTLSVSFFPPQNNDFTRVN
ITLPPGTTLEQTEGVTDRVAAIVEKDPSVERVFERINVGTGSVNIVLKKDRKVTSTEFER
NMSPQLAAFPDARVSFQAQNGGGPDGDSRDIMVYLGGDDPDELTRVANQIAKEMATVPGL
RAPRVGSQLAQPEITIKPRFDLAADLGVTTMALSQTIRIATLGDIEQNSAKFSLSDRQVP
ITVSLSEGARRDLSTLENLPVPTSNGGSVPLKTVADIGFGSGPTTIQRSNQIRRLSIGAD
LAPGAVQGDVQVKVSALPTMKNLPQGVRKLNLGDQKWQNELLFNFAVALVSGVLLVFAVL
VLLYRRFLSPFVNMGSLLLAPLGAAVALHIAGQPVSLFVLIGILMLFGIVAKNSILLIDF
AVEMMNHGMPKNEAIWEAGHKRAQPIVMTTIAMVFGMLPTAVSITGDNSWRAPMGITVIG
GLIFSTLLTLLLVPAYFSIAISIESRIGRLFHKFVGQDAHRTPSGPAPQPAE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgcaacatctcgtcctggtgcattcgtaacccggttttcccgatcgtgctc
ttcgtcgggctcatgcttgccggcctcatctcgttctaccagatgcaggtgaacaacgcg
ccggacatcgacttcccggccgcaaccgtttccgtcagccaaccgggcgcagcgccgaac
gaaatcgagactcagatcacgcagagggtcgaatccgcgatccgtggcgtgaacggggtc
gaggaaatcaacagctccgttcgcgagggcaacagcttcaccttcgtgcaattcgagatc
ggcacgccgaccgaccgtgcggtgaacgacgttcgcaacgcgatcgcccagatccgcggc
aaccttccggagggtattctcgagccgcagatcacccgagtcgacgccgaggaccagccg
atcatgttcgtcggcgccgagacgaccgacatgacgcttgagcagttgagctggtacatc
gacaatacagtctcgaagcgactgctcggcatcgaaggcatcgccgcggtttcccgctcg
ggcggcgtggatcgcacgatccgcgtcatcctcgatccggccgctttgcagtcgcagggg
atcaccgcagcgcaggtcaaccagcagctccggcagagcaatctcaacgccgccggcggc
cgcgccgaggtcgccggctccgaacagtcggtccgggtgctcggcaatgcgcgcaacgct
tacgaactctcgcaaacgcagatcacgctccccggcggccgctgggtccgcctcgccgat
ctgggcgaggtccgtgactcttcgtccgagcagcgctcgatcgccaagatgaacggccgc
caggtcgtcacctttgcggtgcagcgcgcgaagggctcgtccgaagtgaccgcctacgag
gccggttgggcggaagtgcgcaagctcgagaaggagaacccgaaggttcgcttctcggag
attttcaacacggtcgactacaccaaggcgcaatatcggtccgcgatggaaggcctgtgg
gaaggcgccgtcctcgcggttctcgtggtcttcctcttcctccgcgacatccgcgccacg
atcatttcggcgctggccatcccgatgtcggcgatccctgccttctggtttatgagcatg
ttggggatcaccctcaacttcatgtcgacgatggcgatgggcctcgtcgccggcgtcctc
gtcgatgacgcgatcgtcgagatcgagaacatcgtccggcacatgcgcatgggcaagtcg
ggctaccaggccgcgctcgacgcggcggacgaaatcggcctcgctgtccttgcaacgacc
atggcgatcgtcgccgttttcttcccggtcgcgctgatgcccgggatcgccggccagtac
ttcaaggcgttcggctttaccgtcgtcatgtcggtcctgatgagcttgctcgtcgcgcgc
atgataacgccgctggtcgcggcctatttcctccgctcgcatggcgtccaggatcacgcg
aactggaagtggatggacctctatctcaaggttctaaactggagcctcgatacgtcgaag
gcggatgcgctcctcgcacggcttccgaaggccgcccgcaacccgggctattaccttctc
ggcgccttgctccttctgctcgtcattggagctttcgttgccggaacgggcgcgggtatg
ttcggactcggaaagctggcctggaatggcggtgtgacattcgttctggcccttggcgtc
ggaacgctcgtcgcctacggtgcgggcaagctgatcggcttcctcgtgggaatgatgggt
agtcacgggttcgcccagtggcattcgacgatcgcggcccgctggaatgcgcgcctccat
gatcaccgtctggcgatggtcggcgcaggtattggcacgctgctgatgagcatcattctg
ttcggcacgctttccgtgtccttcttcccgccgcagaataacgacttcactcgcgtgaac
atcacccttccgcccggaaccacgctcgagcagaccgaaggcgtcaccgatcgggttgcg
gcgatcgtcgagaaggatccgagcgtcgagcgggtgttcgagcggatcaatgtcggcacc
ggcagcgtgaacatcgtgctcaagaaggaccggaaggtcacgagcaccgagttcgagcgc
aacatgtctccgcagctcgccgccttccccgatgctcgcgtgagcttccaggctcagaac
ggcggcggtcccgacggcgattcccgtgacatcatggtctacctgggcggcgacgatccg
gacgagttgacccgggtcgccaatcagatcgcaaaggaaatggcgaccgttccgggtctt
cgtgctccgcgggtcggaagtcagctcgcgcagcctgaaatcaccatcaagcctcgtttc
gatctggctgcggatctgggcgtaaccaccatggcgctgagccagacgatccgaatcgcg
accctcggcgacatcgagcagaacagcgcgaagttctcgctgtccgatcgtcaggtcccg
atcacggtttccctgtccgagggcgcccggcgcgatctctcgaccctggaaaacctgccg
gttccgacctcaaacggtggctcggttcccctcaagaccgttgccgacatcggattcggc
tctggtccgacgacgatccagcggtcgaaccagatccgtcgactctcgatcggggccgat
ctcgcgcccggtgccgttcagggcgacgtacaggtcaaggtcagtgcgcttccgaccatg
aagaacctgcctcagggcgttcggaagctgaacctcggcgatcagaagtggcagaatgag
cttctgttcaactttgcggtggccctggtctcaggcgtcctgctcgtgtttgccgtgctc
gttctgctctaccggcggttcctgtcgccgttcgtgaacatgggctcgctgctcctggct
ccgctcggcgcggccgtggcgctgcacattgcgggtcagccggtttcgctgttcgtgcta
atcggaatcctcatgctgttcgggatcgtcgcgaagaactcgatcctcctgatcgacttc
gcggtcgagatgatgaatcacggaatgccgaagaacgaggcaatctgggaagccggtcac
aagcgcgcccagccgatcgtcatgacgaccatcgcgatggtcttcggcatgttgccgacg
gcggtgtctatcacgggcgataacagctggcgcgccccgatgggcatcaccgtcatcggc
ggcctcatcttctcgacgctgctgacgctgcttctggttccggcctatttctcgatcgcc
atttcgatcgagtcccggatcgggcggctcttccataagttcgtcgggcaggacgcccat
cgcaccccgtcgggaccggcgccgcaacccgcagagtga
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