Shewanella seohaensis: N7V09_06685
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Entry
N7V09_06685 CDS
T08778
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sseh03009
]
N7V09_06685 (rlmC)
Enzymes [BR:
sseh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
N7V09_06685 (rlmC)
Ribosome biogenesis [BR:
sseh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
N7V09_06685 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UXM83214
LinkDB
All DBs
Position
1483118..1484272
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AA seq
384 aa
AA seq
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MSTLVQCGYFERGQCQSCRHIKLPMAQQLAAKTQELQQLLAAFVDNAEAQFLPPVVGDSS
GFRNKAKMVVLGAAHAPVLGIVSPSGEAVSLCDCLLYPADMQALLHRLERFVQQAGIPPY
RVDKAKGELKFILLTRSQVRGEYMLRFVLRSRDAIARIERELPALMAEYPQIKVVSVNLQ
PIHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFA
PASLWDLFCGVGGFGLHCAAKDIPLTGIEIEAEAIACAKMSAQLMGLDNVQFMALDSTDF
AKGDAAQTKPELIIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGHIRGYRL
TKVQLFDLFPHSDHFEVLALLVKD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacattagtacaatgtgggtattttgaacgaggccaatgccaatcctgtcgccat
attaagctccctatggcgcagcaactggcggccaaaacccaagaattgcagcaattgtta
gcggcttttgtcgataacgccgaagcgcagtttttacctccggttgtaggtgacagcagc
ggttttcgtaacaaggcgaaaatggtcgtcttgggcgcggcccatgctcctgtactgggg
attgttagtcccagcggcgaggcggtgagcctgtgtgactgtctgttgtatcctgctgat
atgcaagccttactccaccgtttagagcgctttgttcagcaggcgggcattccgccttac
cgtgtcgataaggccaagggcgagcttaaatttatcctactgacgcgcagccaagtgcgt
ggcgagtatatgctgcggtttgtgctgcgctcacgagatgccatagcccgtatcgagcgt
gaattgcctgcgctgatggccgaatatccgcagatcaaagtcgtttcagtcaatttgcag
cctattcatatggccatcttggaaggtgaggaggagattttcctaaccgaaaacactcgc
ctcgaagagcgctttaacgatgtgcctttgtttattcgccccaagagcttttttcaaacc
aacccgcaggtggcggcaaagctgtatcaaaccgcccgtgagtgggtggctgactttgcg
ccagcttccctttgggatttattttgtggtgtgggcggttttggtttgcactgtgcagct
aaggatatcccattgacagggattgaaattgaggccgaagccattgcctgcgctaagatg
tcggcgcagttgatggggctggataacgtacagtttatggcgctcgattccactgacttt
gccaagggcgatgcggcgcaaactaagcccgagttgattattgtcaacccgccgcgccgt
gggatcggcgagtctctgtgccattccttaagtgaatttgcccctaaggcgattttgtat
tccagctgcaatcctaaaaccttagccaaagatctcggccatattcgtggctatcggtta
actaaggtgcagttgttcgatctctttccccactcggatcatttcgaagtattagcctta
ttagtgaaagactaa
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