Shewanella sedimentimangrovi: JYB85_07185
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Entry
JYB85_07185 CDS
T07846
Symbol
odhB
Name
(GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00020
Citrate cycle (TCA cycle)
ssem00310
Lysine degradation
ssem00380
Tryptophan metabolism
ssem00785
Lipoic acid metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
ssem01210
2-Oxocarboxylic acid metabolism
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB85_07185 (odhB)
09105 Amino acid metabolism
00310 Lysine degradation
JYB85_07185 (odhB)
00380 Tryptophan metabolism
JYB85_07185 (odhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JYB85_07185 (odhB)
Enzymes [BR:
ssem01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
JYB85_07185 (odhB)
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GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
HlyD_3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QSX38591
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Position
1697885..1699081
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AA seq
398 aa
AA seq
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MSIEIKVPVLPESVADATIATWHVKPGEAVSRDQNLVDIETDKVVLEVVAPEDGHISEFL
FNEGDTVLAEQVIAKFVAGAVAGQEVTKAEAEAAAPAAAASDESNDALSPSVRRLIAEHN
LDAAKIKGTGVGGRITKEDVEAFIKSAPAAKPAAAVAAAPVALSGDRSEKRVPMTRLRKT
IATRLLEAKNSTAMLTTFNEVNMKPIMDIRKQYQDIFEKKHGIRLGFMSFYVKAVTEALK
RFPEVNASIDGDDIVYHNYFDVSIAVSTPRGLVTPVLRDTDNMSLADIEKAVRDLAIKGR
DGKLTVEDMTGGNFTVTNGGVFGSLMSTPILNLPQSAILGMHAIKDRPMAVNGQVEILPM
MYLALSYDHRIIDGRESVGFLVTIKEFLEDPTRLLLDI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgaaattaaggtacccgtactgccagaatctgttgccgatgcaaccatcgcg
acctggcacgttaagcccggtgaagcggtatcccgcgaccaaaacctggtggatatcgag
accgacaaagtggttctggaagtggtagcaccggaagatggtcacatcagtgagttcctg
ttcaacgaaggtgacactgtgctggccgagcaggtgattgccaagtttgttgccggtgcc
gttgccggtcaggaagtgaccaaggccgaagccgaagctgcggctccagctgccgctgca
agcgacgaaagcaatgacgccctgagcccatcagtgcgccgcctgatcgccgagcacaac
ctggacgctgccaagatcaagggcacaggtgtgggtggccgtatcaccaaggaagatgtg
gaagccttcatcaagtctgctcctgccgccaagcccgctgccgcagtggccgcagcgcct
gtggccctgtctggcgatcgcagcgagaagcgtgtaccaatgacccgtctgcgcaagacc
attgccacccgcctgctggaagccaagaactccaccgccatgctgaccaccttcaacgag
gtcaacatgaagcccatcatggatatccgcaagcaatatcaggatatcttcgagaagaag
cacggtatccgcctgggcttcatgtccttctacgtgaaggccgtgaccgaagccctgaag
cgtttccctgaagtgaacgcgtccatcgatggcgacgatatcgtttaccacaactatttc
gacgtcagcatcgctgtgtctactccacgtggcctggttaccccggtactgcgtgacaca
gacaacatgagcctggccgatatcgaaaaggccgtgcgcgatctggctatcaagggccgt
gacggcaagctgaccgtagaagacatgaccggcggtaactttaccgtgaccaacggtggt
gtattcggttctctgatgtctaccccaattctgaacctgccacaaagtgctatccttggc
atgcatgccatcaaggaccgtcctatggcagttaatggtcaggttgaaatcctgcccatg
atgtacctggcactctcatatgaccaccgcattatcgatggtcgtgagtctgttggcttc
ctggtgaccatcaaggaattcctggaagacccaacccgtctgctgctggatatctaa
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