Shewanella sedimentimangrovi: JYB85_07710
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Entry
JYB85_07710 CDS
T07846
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00270
Cysteine and methionine metabolism
ssem00450
Selenocompound metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01230
Biosynthesis of amino acids
Module
ssem_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JYB85_07710
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JYB85_07710
Enzymes [BR:
ssem01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
JYB85_07710
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QSX38681
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All DBs
Position
complement(1802721..1803914)
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AA seq
397 aa
AA seq
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MSDKPMKTATKIVSLGRDKKYSMGVINPPVFRASTIVFDSMEQMRHAARHKHNGEMFYGR
RGTPTHFSFQAAIAELEGGVGTALYPSGAAAISAALLSFLKTGDHLLMVDSVYEPTRDLC
DKVLKGYGIETSYYDPLIGAGIAELIRPNTKVLFLESPGSITMEVQDVPTMARIAHEHGL
TVMLDNTWASPINCRPFDMGVDISIQAATKYIVGHSDVMMGTATANAGHWDQLREHSYLL
GQTTSPDDVYLAARGLRTLGIRLAQQDKNARAVADWLLTRPELDHLRHPAYPSCPGHEFF
GRDFSGGNGLFSFVLKDGSNAALEAFVEGMEHFKMGFSWGGYESLILAITGIDRIRSATR
WDSSKPLIRLHIGLEDPEDLIADLTAAFERYNAVMGR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaagcccatgaaaaccgccaccaaaatcgtcagtcttggccgcgacaaaaaa
tacagcatgggggtgattaacccaccggtattccgcgcctccaccatagtcttcgattcc
atggagcagatgcgccacgcagccaggcacaaacataatggcgaaatgttttatggccgt
cgcggcacccccacacacttcagcttccaggccgccattgccgagctggaaggcggcgtg
ggcacggccctgtatcccagtggcgcagccgccatcagtgccgccctgctctctttcctt
aagaccggcgatcacctgctgatggtggacagcgtttatgaacccacccgggatctgtgc
gacaaggtgctcaagggctatggtatagaaaccagctattacgatcccctgataggtgca
ggcatagcagagcttatccgccccaataccaaggtgctgttcctggagtccccgggttcc
atcaccatggaagtgcaggatgtgcccacgatggcgcgcattgcccacgagcacggcctg
accgtgatgctggacaatacctgggcgtcgcccatcaattgccggccgttcgatatgggg
gtggatatttccatccaggccgccaccaagtacatagtgggtcattcggatgtaatgatg
ggtaccgcgacggccaacgccggtcactgggatcagttacgggagcacagctacctgctg
ggccagaccacctcccccgatgatgtctacctggcggccagaggattgagaaccttaggg
atccgattggcacagcaggataaaaacgcccgcgccgtcgccgactggttgctgacccgc
cccgagcttgaccacctgcgccacccggcctaccccagctgtcccggccatgagtttttc
gggcgcgatttcagcggcggcaacggcctgttttcctttgtgctcaaggatggcagcaac
gcagcgctggaagcctttgtggaaggcatggagcattttaagatgggtttctcctggggc
ggctatgagagcctcattctcgccatcacgggcatagacaggatccgcagcgccacccgc
tgggacagcagcaaacctttgatccgcctgcacataggcctggaggatcccgaagattta
attgccgatctgaccgccgccttcgagcgctataatgccgtcatgggccgctga
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