Shewanella sedimentimangrovi: JYB85_10905
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Entry
JYB85_10905 CDS
T07846
Name
(GenBank) proline racemase family protein
KO
K01777
proline racemase [EC:
5.1.1.4
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00330
Arginine and proline metabolism
ssem00470
D-Amino acid metabolism
ssem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
JYB85_10905
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYB85_10905
Enzymes [BR:
ssem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.4 proline racemase
JYB85_10905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QSX35869
LinkDB
All DBs
Position
complement(2503403..2504443)
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AA seq
346 aa
AA seq
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MGPLTLNSELLSQFRQFTCIDAHTEGEPLRIITSGYPDIPGDTMLAKRRYVKEKLDDYRR
VLMYEPRGHADMYGALLTGPVTPGADFGVLFLHNEGYSSMCGHAVLALTKIVCETGAIPL
GTEPREIRIDAPAGLIRAQAVRNADGSIGASFLNVPSWAEALDLCVGVPGIGQVNFDIGF
GGAYYAYVDADALGLECTPDNSARLIDWGRRIKLAVMGSFGITHPLEPDLGFLYGTIFYS
SRVSDGNNHSRHVCIFADGELDRSPTGTGVAGRIALLRARGEVALGETLRIESIVGGCMG
VSATDSCDFYGKQAVIPRVSGRAFITGEHRFLLHPDDIFPSGFLLR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggacccttgacactcaacagtgaattattgtcgcaattcaggcagttcacctgtatc
gatgcccacaccgaaggggaaccgctgaggattatcacctcgggttatcctgatattccg
ggcgacaccatgctggccaagcggcgctatgtgaaagaaaagcttgatgattatcgccgg
gtgctcatgtatgaaccccgtggccatgccgacatgtacggcgccctgttgaccgggccg
gtgacacccggtgcggatttcggcgtcttgttcctgcataacgagggttattccagcatg
tgcggccatgcggtgttggccctgaccaagattgtctgtgagacaggcgccattcctctt
gggaccgagccgcgggaaatccgcatcgacgcgcccgcaggactcattcgggcccaggcg
gtgcgaaatgccgatggcagtattggggcgagttttctcaatgtgccttcctgggccgag
gcgctggatctgtgtgtcggagtgccaggcattggccaggtcaattttgatataggcttt
ggcggcgcctactacgcctatgttgatgccgatgctttgggactggagtgtactcccgac
aatagcgccaggcttatcgattggggacggcgcatcaagctggccgtaatgggatctttt
gggataacacatccgttggagccggatctgggctttctttatggcaccatcttctactca
tccagggtcagtgatggcaacaatcattcccgccatgtgtgcattttcgccgacggtgaa
ctggaccgctcacccacgggcacaggggttgccggccgcattgccctgctgcgggccagg
ggcgaggtggccctgggcgagaccttgcgtatcgaaagcatagtgggcggttgcatgggc
gtcagcgccaccgacagctgtgacttttatggcaagcaggcggtgatccccagggtcagt
ggccgggcctttattaccggtgagcacagattcctgctgcatccggacgacattttccca
agcggatttttgctgaggtga
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