Shewanella sedimentimangrovi: JYB85_17280
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Entry
JYB85_17280 CDS
T07846
Name
(GenBank) GHKL domain-containing protein
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem01503
Cationic antimicrobial peptide (CAMP) resistance
ssem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB85_17280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
JYB85_17280
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssem01001
]
JYB85_17280
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ssem02022
]
JYB85_17280
01504 Antimicrobial resistance genes [BR:
ssem01504
]
JYB85_17280
Enzymes [BR:
ssem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JYB85_17280
Protein kinases [BR:
ssem01001
]
Histidine kinases
OmpR family
JYB85_17280
Two-component system [BR:
ssem02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
JYB85_17280
Antimicrobial resistance genes [BR:
ssem01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
JYB85_17280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HATPase_c_5
HATPase_c_2
HATPase_c_3
HisKA
CusS
Motif
Other DBs
NCBI-ProteinID:
QSX36989
LinkDB
All DBs
Position
3884344..3885720
Genome browser
AA seq
458 aa
AA seq
DB search
MMPKVADNPRPMSLKTRLRLSALLLLLLLLPAIGMALHNAFERQASSGTRDELNALLYSV
LTLAEVDSDGLQMPDALAQPQFNIDKSGLYAIISGADGAVLWRSGSLVSQALPATLPRPA
RGERRFGELSFGEPSLGDERQFILSFSASFETRNAQGRLQDFPLTVHIIKSRAAHDKLMR
DFRHSLWRYLALTAILLAAVQGLWLLWTLKPLQHFQRELEAVENGRQQLIGDAFPRELQP
LVRQLNSLLTTEQNQRTRYRNALADLAHSLKTPLAVLKSQPQLPAAALEQIDAISYSISH
QLKRAQSAGAASWHQGVAIAEVTDKLLRTLGKLHADTQLQLTQSLAPDLMFKGDSGDLTE
LLGNLLDNACKAAKSQVRIAGVMQGNNLHLVVEDDGPGIPDELKERIFERGMRADTYEKG
HGIGLAIVRDLVDSYQGRLNLGRSEALGGARFELVFRQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaaggtggctgataatccccgccccatgtcactgaaaacccggctgcggctc
agcgccctgttgctgctgttgttgttgctgccggccattggcatggcactgcacaatgcc
ttcgagcgccaggccagcagcggcacccgcgacgaactcaatgccctgctgtattcggtg
ctgaccctggcggaagtggacagcgacgggttgcagatgccggacgccttggcccaaccc
cagttcaatatcgacaaatccgggctgtatgccatcatcagcggcgccgacggtgccgta
ctgtggcgctcgggctccctggtgagtcaggcgctgcccgctaccctgccccgtccggcc
cggggcgagcgccgctttggcgaactgagctttggcgaaccgagcctcggcgatgagcgg
caatttattctcagcttcagcgccagcttcgagacccgcaacgcccaaggccggctgcag
gacttccccctgacggtgcacatcatcaaatcccgcgccgcccatgacaagctgatgcgc
gacttcaggcacagcctgtggcgctatttggcactgaccgccatcttgctggcggcggtt
cagggcctgtggctgctgtggaccctgaaacccttgcaacatttccagcgggagctggaa
gcggtggaaaacggccgtcaacaattgattggcgatgcctttccccgggagctgcaaccc
ctggtgcgccagctcaattcactgctgaccacagagcaaaatcagcgcacccgttaccgc
aatgccctggcggatctggcccacagtctgaaaacccccttggccgtgctcaagagtcag
ccgcagttaccggcggcggcactggagcaaatcgacgccatcagctattccatcagtcat
cagctgaagcgggcccaaagtgccggcgccgcctcctggcatcagggggtagccattgcc
gaggtgaccgacaagctgctgcgcaccttgggcaaactccatgcggatacccagctccag
ttaacccagtcgctggcgccggatctgatgttcaagggtgacagcggcgatctgaccgaa
ctgctcggcaacctgctcgacaacgcctgcaaggccgccaaaagccaggtgcgtatcgcc
ggggtgatgcaaggcaacaacctgcacctggtggtggaagatgatggcccggggatccca
gatgaactgaaagagcgcatcttcgagcgcggcatgcgcgcagatacctacgaaaaaggc
cacggcataggcctggcgatagtgcgcgacctggtcgacagctaccagggccgacttaac
ctgggccgtagcgaggccctcggcggcgcccggtttgagctggtgttccgccagtaa
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