KEGG   Solea senegalensis (Senegalese sole): 122758210
Entry
122758210         CDS       T07721                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122758210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssen03000]
    122758210
   04121 Ubiquitin system [BR:ssen04121]
    122758210
   03036 Chromosome and associated proteins [BR:ssen03036]
    122758210
Enzymes [BR:ssen01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     122758210
Transcription factors [BR:ssen03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    122758210
Ubiquitin system [BR:ssen04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122758210
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122758210
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122758210
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD JmjC Cupin_8 F-box
Other DBs
NCBI-GeneID: 122758210
NCBI-ProteinID: XP_043868142
LinkDB
Position
LG21:11256836..11279910
AA seq 1392 aa
MAVPAEACTETGRRLRSICRRMYDENEDLSDVEEITNIRGFSVEEKLTSDSYSANFVHTM
DGKDFTYEYVQREGLRIPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KQSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGHKVFWLVPPT
THNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIESRTKVNSKFRFPFYYDICWYVLERYLHCLTKRSYLSLEIRKE
PVLMDYEIKATTESPYSDSRSQDVNEDSCETQMKEDPGEKLERVAQDGSCSPDHGRGQHL
RAVLSVDSEDSCNPGSSSLDFPKTPSDSPASESQNKLTHLTEFELSGLRTLVEKLESLPD
HKKCVPLGIDNPQALLEDLKVVLKEHADDDPKLAVTGAPVVYWPKKSLKPRPPNRPKPKM
AASPGSAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEDKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKEPRLNRESREEPDLP
MVATATVTALTTTPAVKRKAEREEIPKRKEEEPPKKRPPLLSLDGTPRPRHEDNPLRKKR
KLFDTNDEPVVKKKKKPPKPDDPMCPKLLRQIKTERDRGDEEANQEDHEEDGFFLDKILL
KEKTQYDDEDQEEDEVEEEEESLVKERDSSVENKAKVMLSPLLRTSAARESDQPTSNSPR
AGPSSESGDAQVRSSAQLKARHQRRRLPNKELSKELKQEITQTEDCLSNQNHGSVKTEDS
PVHHNRRPLKSEDSMSNQNRKPPKTEDLTPNQSRRNLKMEEGVTSQNRRPLKTEDCLANQ
NHRPIKPEPENEVEEQKPRWPLNTGSSDLGDWLRHRGREVNGTPRGYSPLGWNRNTPICP
RPLPCRSPPKCIQMERHVIRPPPISPPPDRLPLNDGEAHVMRREMWMTVFGQLTHRDLCV
CMRVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPLALDLSWTNISKKQLSWL
INRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPG
QLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAGT
TTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVSVQF
ELIEDKLLQKIS
NT seq 4179 nt   +upstreamnt  +downstreamnt
atggccgtgcctgcggaagcatgcacggagactggacgcaggctgcgctccatctgccgg
aggatgtacgacgaaaacgaggacttgtctgatgtggaagaaattacaaacatcaggggg
ttcagtgtggaggagaagctcaccagtgactcttatagtgcaaactttgtccacacaatg
gacggtaaagatttcacatatgaatatgtgcaaagggaaggtcttcgaattccactcata
ttcaaagagaaagacggacttggcatcagaatgcctgatccagaattcacagttagtgaa
attaaaggcttggttggcagtcgtcggtcggtggatgtcatggatgtgagcactcagaag
ggctccgagatgagcatggctcagtttgtgagatattatgagacaccggaggaagagcgc
gacaaactcttcaatgtcatcagcctagagttcagccacactaagctggagaacctcatc
aagcgacccacagtggtggatcaggttgactgggtggacaacatgtggcctccggatcta
aaacaaagccaaacagaagccaccaatgtcatctcagagatgaagtaccctaaagtacaa
aggtactgcttaatgagcgtgaagggctgctacaccgatttccacatcgatttcggggga
acttcagtttggtatcatgtatttaaggggcataaagtgttctggctggtgcctcccacc
actcataacctcgccttgtatgaggactgggttttgtcaggaaagcagagtgatatcttc
ctgggggatcgagccgatggatgccagagagtggagcttaagcaaggatacaccttcttc
atcccatctgggtggattcatgctgtctacactcctgaggacacactggtgtttggaggc
aacattctgcacagcttcaacatccctatgcagctcaccatccatgagatagagagcagg
actaaggttaattctaagttccgtttccccttctactatgatatctgctggtatgtcctg
gagagatacctgcactgcctcaccaagcgctcctacctttctctggagatccgtaaagag
cctgtgctaatggactatgagattaaggcaaccacagagagcccctactctgactcaagg
agccaggacgtgaatgaggactcatgtgagacccaaatgaaggaggaccctggagaaaaa
ctggagcgcgttgctcaggatgggtcctgctctcctgaccacgggaggggtcaacacctc
agagctgttttatccgtcgactctgaagacagctgtaatcctggctcctcttctctggat
ttccctaaaaccccctctgactctcctgcgtcagagtctcagaataaattgactcatttg
acagagtttgaactgagtggacttaggacactggtggagaagctggagtcactccctgat
cacaagaaatgtgtcccactgggaatagacaacccgcaagccctgctggaggacctgaag
gttgtgttaaaagaacatgctgacgatgaccccaaattagcggtcactggagctcctgtg
gtgtactggcctaagaaatctttaaagccgcggcctcccaaccggccgaaacctaagatg
gctgcctctccgggatcagcagtcaagctgtcagcaagtcggggaacatctggcgcccgg
agaagacggacccgttgtcgcaagtgtgaggcctgcctgcggacggagtgcggagagtgc
cacttctgtaaggacatgaagaagtttggcgggcctgggcgtatgaaacagtcctgcatc
atgaggcagtgcatcgcccctgtgctgccccacacagcagtgtgtttggtctgtggagag
gcaggaaaggaggacaccgtggaggatgaagaagacaaatttaatctcatgctcatggag
tgctcaatctgcaatgagatcgttcatcctaactgtctgaaggtaaaagattcaaatgga
gtggtcaatgatgagttgccaaactgctgggagtgtccaaagtgcaaccacgctgggaaa
acggggaaagcgtctaagcaaaaaagggggccagggtttaaatacgcatcaaaccttccc
ggctcgcttcttaaagaaccacggttaaaccgggaatcgagagaagagcctgacctgccc
atggtggccacagcgactgtcaccgctttgacgaccacaccggctgtgaagaggaaggca
gagcgggaagagattcccaagaggaaagaggaagaacctcccaaaaaacgaccccccttg
ctgtctctggatggtacgccgcggccaaggcacgaggacaacccgctgaggaaaaagagg
aagctttttgacaccaatgatgagcctgttgtaaaaaagaagaagaaacctccgaaacca
gatgatccaatgtgtccaaagctactacgtcaaatcaagacagagagggatcgcggtgat
gaagaagccaaccaggaggatcatgaagaagacggatttttcttggacaaaattctttta
aaggagaaaacccagtatgacgatgaggaccaagaggaagatgaggtagaagaggaagag
gagtcactggtaaaagagagagacagtagcgtggagaacaaagccaaagtcatgttaagt
ccactgctgaggacatctgcagccagagaaagtgaccagcccacctccaactctcccaga
gccggacccagcagtgaatcaggagatgctcaggtgaggagctctgcccagctcaaagct
cgccaccagcgccgccgcctacccaacaaagagctgagcaaagagttgaaacaggagatt
actcagacagaagactgtttgagcaatcagaaccacggttcggtgaagacagaggacagt
ccagtccatcacaatcgacgaccactgaagagtgaggattccatgtccaatcagaaccgt
aaaccaccaaaaactgaggacttgacccctaatcagagccgtaggaaccttaaaatggag
gaaggtgtgaccagtcaaaacagacggccactgaaaacggaggactgcctggccaatcag
aaccacaggccaattaaacctgagcctgagaacgaagttgaagagcagaagcccaggtgg
cctcttaataccggcagcagcgacctcggcgactggctgcgacatcgggggcgtgaggtg
aacgggacgccacggggttactcgccccttggctggaacagaaatacaccgatatgcccc
cggccgcttccctgccggtcgccgccaaaatgcattcaaatggagcgccacgtgatccgg
ccccctcccatcagcccgccacctgacaggctgccactgaacgacggcgaagcccacgtg
atgcgaagagagatgtggatgacggtgttcggtcagctgactcacagagatctttgcgtg
tgcatgcgcgtttgtaggacgtggaacagatggtgctgtgacaagagactctggaagcac
atcaatcttaaccgctgtaagtccatcactcctctcatgctgagcggcatcatccggaga
cagccgctggccttggacctcagctggaccaacatctccaagaaacaactcagctggctg
atcaacagacttccaggcctgcgtgtgctgctgctgtcaggttgctcctgggtggccgtc
tctgctctctgcacctccagctgtcctctgctgcgaactctggacgttcaatgggttgag
ggactgaaagatgcccagatgagggacctgctgtcgcctcccacagataacaggccaggt
cagttagacaacaggagtaagctccgcaacgtggaggacctgcgtctggcggggttggac
atcacagacacatcactgcgcctcatcatccgctacatgcctttgctgtccaagctggac
ctcagctactgcaaccacgtgacggaccagtcagtgaacatcctgactgctgcggggacg
accaccagagactcgctcacagacatcaacctgtcagtctgtaacagggtcacagaccag
tcgctgacctatttcaagcgttgtgggagcatatgtcacatcgacctgcgatactgcaaa
caggtgaccaaggaaggctgtgaccagttcattgcggaaatgtccgtcagcgtgcagttc
gaactgatcgaggacaaactgctgcagaagatcagctag

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