Solea senegalensis (Senegalese sole): 122758997
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Entry
122758997 CDS
T07721
Name
(RefSeq) breast cancer type 1 susceptibility protein-like
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03440
Homologous recombination
ssen03460
Fanconi anemia pathway
ssen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122758997
09124 Replication and repair
03440 Homologous recombination
122758997
03460 Fanconi anemia pathway
122758997
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122758997
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122758997
03036 Chromosome and associated proteins [BR:
ssen03036
]
122758997
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122758997
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122758997
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122758997
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122758997
Multi subunit type E3
BRCC complex
122758997
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122758997
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122758997
BRCA1-A complex
122758997
BRCA1-B complex
122758997
BRCA1-C complex
122758997
BRCA complex
122758997
FA (Fanconi anemia) pathway
Downstream FA components
122758997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-Nse
RTT107_BRCT_5
zf-RING_5
zf-RING_4
zf-ANAPC11
zf-RING_10
zf-MIZ
PTCB-BRCT
zf-rbx1
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122758997
NCBI-ProteinID:
XP_043869374
LinkDB
All DBs
Position
LG18 :complement(13799159..13825828)
Genome browser
AA seq
1393 aa
AA seq
DB search
MKTPKAADVKKGISVLWETLQCPICLDLLTAPVSTKCDHQFCKFCIGKLLDNSKQNRGNC
PVCKSKITKRSLQESPGFQRLVGGLQDMIQAYEHDTGTNYFTGMNLEKKPTGISDAEAST
LPLHMSPEATPVTDIDEVENAEHDDLPRSHSSTIAAQIGFARLMGLEDLTSLTTENEGLD
SGLGDAPPTSDKKVRSSTDNLEPIETDMADAMEKTTAKTRGKTRSSKLKNTSLPLLATPD
ETVCQPLRKSSRKKHKKKPEPDKILEQKQKKSLEKVAEWLMKVPTEESLELEKADECDND
SDSDSSSSTIDVKLHRSDVNPKREDRAKALEEHVFGAVYTRDRRGKRSTCPPLQARTARK
QKTGFEDEHQSDLEEEQSLADEVHDTSSEISEEAEPMEGVEENDVDKYREELLESEEKQS
KEEEPCPVPALQPRPERNSKKRMHEVPQQVDSDLKEQAETKLETAEQKKTDKKKGKPAKV
PKPLVLVSVQAGETSPKTRLRSDEVQVHIESYPSSEDQETPLMRSRRRSRRLQLLTEEVQ
EGQKKVNLKAKAVEKGDGVGKQSEKVNGETESAKNGNVTKLMKRNGCIYDQELGGIEMME
CEKTSHQEQESFAEVPDAEALPEASAACHVPAVPASASSEEPTVVYPTLESNSQTNEALK
DNESEQSARESKHAITETEKEEDKNDSEMDTEQLLRSFKSTKRKSFHLGGPCVKRSRSSD
QGSLHGTEIRGDESAKKISTKTNEISNQESLKSSLLCEDLISPSNSLTLVRKTVEKQVVA
EAMGPVIIWSSQDGAATIGLSGCSSALSPNKVSKCEKESPHLSAVPQIIDSGLRFINHEE
LHEASECSHISNTQFDCPKRDAEKWKDTTDAVENHPDNTRDDVLAADSLTPEGLVTPAVQ
MNANETKTNNSGSAELSSHSSINSNPRRKRKTQRLESSPESDCSGSREDLPSLSQFLGKS
ALQAAVAQEQPDSSEAVERLCRPPSCPSPDCVESSQASVDLFGTPEECEVPVNDNGVSME
IVESSQFSSEVQVNTQQKIQMQKELVRLEKLMALVSEVLQEKESSPAKETNQGSKVTGPE
TDRPDPSCKDTCQVSEQQKGVQDAEPEPSTRASDSREVVQPSVTKRGGNSDMTVQHCTHA
GQSTQATEASKTTISHAAAKTPKSCSSLSDAQEDKENTTPPKDGGKAKLVLVSSGLGPSE
QVMVKRFAKRVGAHVVSQVTSEVTHVIMCTDEQLVCERTLKYFLGIAGRKWVVSFQWITE
CFKQKKLLDESLFEVKGDVVNGPNHQGPSRARTTEDSNLLMKGYEICFKGPFTDMTTDEM
EWMVELCGAAVVKDPLLFDSKQKSHQLLIVQPGPELLSSAYSSLSREATVVTRGWLLDTV
ATYTLQNYNRYSL
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaaaggcagcagatgtcaaaaagggtatatcagtgctgtgggagaccctg
cagtgtcccatatgcttggatttattgacagcaccggtatcaaccaagtgtgaccatcag
ttttgcaaattttgtatcgggaaacttttggacaactcgaaacaaaaccgaggcaactgt
ccagtttgtaaatccaagatcacaaaaaggagcttgcaggaaagtcctggctttcagaga
cttgtaggaggattgcaggacatgattcaagcatatgaacatgacacgggcacaaactac
ttcaccggaatgaacctggaaaaaaaaccaacaggtatctctgacgctgaagcctccaca
cttcctctacatatgtcgcctgaagctactcctgtcactgacattgacgaggtggagaat
gcagagcatgatgatctgccaaggtcccactcttcaacgattgcagcccagattggattt
gcaagactaatgggacttgaagatttaacttctttgacgacagaaaacgaaggcctggac
agtggccttggtgatgccccaccaacttctgacaagaaagtgcgcagctcgacagataac
ttggaaccaatagaaacagacatggctgatgctatggaaaagacaacagccaaaactaga
ggcaaaacaaggtctagtaaattaaagaatacctctcttccactactagcaactccagat
gagactgtctgtcaaccattaaggaagtcctcgaggaagaagcataaaaagaaaccggag
cctgacaagattcttgagcaaaaacagaagaaaagtctagagaaggttgcagagtggctc
atgaaagttccaacagaagaaagtctagagctagaaaaagcagacgaatgcgataacgat
tctgacagcgattcttcctcttcaacaatagatgtcaaactacacagaagtgacgtaaat
cctaagagagaggatcgtgcgaaagcccttgaagagcacgtgtttggagctgtctacacg
cgagaccgaagagggaagaggagcacttgtcctccacttcaagcacgaacagcaagaaaa
cagaaaacaggctttgaagatgaacatcagagcgacttggaggaagagcagtcactagca
gacgaagtacatgacacgagcagcgaaatttccgaagaagccgaaccgatggaaggtgtt
gaggaaaatgatgttgacaaatacagggaagagttgcttgaaagtgaagaaaaacaaagc
aaagaagaggaaccttgtcctgtgcctgctttacaaccacggccagaaagaaattctaag
aaaagaatgcatgaggtcccgcagcaggttgacagtgatttaaaggagcaggctgaaaca
aagttagaaacagctgagcaaaagaagactgacaagaagaaaggcaaaccagctaaagtg
ccaaagcctcttgttctagtcagtgttcaagctggtgaaactagtccaaagaccagacta
agatcagacgaggttcaggtacatattgagagctatcccagcagtgaggatcaagaaacc
cctctcatgaggagcaggaggagaagcagaaggcttcaacttttaactgaagaagtccag
gaaggccagaagaaggtaaacttgaaagccaaggccgtggaaaaaggcgacggtgttgga
aagcaatcggagaaagttaacggtgaaactgaatcagctaagaatggaaacgtgacaaag
ctaatgaaaagaaacggatgtatttatgatcaagaattgggaggaattgaaatgatggag
tgtgagaaaacatctcaccaagaacaggagtcttttgctgaagtgcccgatgctgaagct
ctgcctgaagccagtgctgcttgtcatgtccctgcagtcccagcttctgcaagttcagaa
gaaccgactgtggtgtatccaacacttgaaagtaacagtcagaccaatgaagcactcaaa
gataatgagtctgaacagtcagctcgtgagtctaaacatgccataacagaaacagaaaag
gaggaggacaagaacgacagcgagatggacacagagcaactgctccggagctttaaatcc
actaaaaggaaatctttccatctcggtggtccttgtgtgaaaagaagccgtagctctgac
caaggaagtttgcacggcactgaaattaggggggacgaatctgcaaaaaagatcagtaca
aagacgaatgaaatttccaaccaggaatcattaaaatcatccttattgtgtgaggatttg
atttccccctctaactcacttaccctagtaagaaaaacagttgagaaacaggtggtggct
gaagccatgggccctgtcatcatttggtcaagtcaggatggtgcagctactatcggtctc
tctgggtgtagcagtgccctcagtcctaataaagtatcaaaatgtgaaaaagaaagtccc
catctttctgccgtccctcaaataatagattccgggctccgcttcattaatcacgaggag
ctacatgaagcctcagagtgctctcacatctccaacacccagtttgattgtccaaaaaga
gatgctgagaagtggaaggacacaacagacgctgttgaaaatcacccagacaacacgcgt
gatgatgtcttagctgcggactctttaacgcctgaaggcctggtaacaccagccgtccaa
atgaatgccaacgaaacaaagacaaacaacagtggtagtgcagagctcagctcgcactcc
tccatcaacagcaacccaagaagaaaaagaaagacgcaaaggctggagtcttcacccgag
tctgattgcagtggatccagagaggacttaccgagtttgtctcaatttctggggaagtcg
gctcttcaagctgctgtggctcaggagcagccagactccagtgaagctgttgaacggttg
tgtcgtcccccctcgtgcccaagcccggactgtgttgagtccagccaagcgtctgtggac
ttgtttggcactccagaagagtgtgaggtcccagtaaatgacaatggtgtttccatggag
atcgtggagtcgtcacaattttcaagcgaggtccaggtaaacacacagcaaaagatccaa
atgcagaaggagctggtgaggctggagaagttgatggctctggtgtcagaggtgcttcag
gagaaagagagcagtcctgccaaagaaacaaatcaaggcagcaaagtcacaggcccagag
actgacaggcctgaccccagttgcaaggacacatgccaagtttcagagcagcagaaaggt
gttcaagatgcggagccagagcccagcacaagagcatctgacagcagagaagtcgtccag
cccagcgtgacaaagcgtggcggcaattcagacatgactgtgcagcattgcacacacgcg
gggcagagcacacaagccactgaagcctccaagacgacgatttcacatgcagcagcaaaa
acgcccaagagctgtagttcactgtcagatgcacaagaagacaaagaaaacaccacaccc
ccgaaagacggaggtaaagctaagctggtgctggtgtcatctggattagggcccagcgag
caggtaatggtgaagaggtttgccaagcgagttggcgcccatgtggtttctcaggtgaca
tcagaggtgacccatgtcatcatgtgtacagatgaacagctggtatgcgagcgcactctg
aaatacttccttggcattgcaggcaggaagtgggtcgtgagcttccagtggattaccgag
tgcttcaaacaaaagaaactcctcgacgagagtctctttgaagtgaaaggtgatgtcgtg
aacgggccaaaccaccagggcccctcgagagctcgtaccactgaggacagtaatcttctc
atgaaaggctacgagatctgcttcaaggggccgttcacagacatgactacagatgaaatg
gagtggatggtggagctctgcggtgcagctgtagtgaaagatccacttctcttcgacagt
aaacagaagtctcatcagctgcttattgtccagcctggaccggagttgttgtcgtccgca
tacagcagtctctccagagaagccactgttgtgacgcgtggttggctcttggacaccgtt
gcaacctacacccttcaaaactacaaccgctactcgctgtga
DBGET
integrated database retrieval system
