Solea senegalensis (Senegalese sole): 122759332
Help
Entry
122759332 CDS
T07721
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122759332
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122759332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRPM2
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
122759332
NCBI-ProteinID:
XP_043870053
LinkDB
All DBs
Position
LG18:16165638..16193381
Genome browser
AA seq
1268 aa
AA seq
DB search
MREAQGGVVVGVGGGGGGGGKSHKSEKDQSWIPKIIKKRVCSTFVEDSLSNGSLCQCGGV
RDAHASVALSDYFSTAIINHWDSAQHSSEYPTDAFGELQFAGASKRHSYFLRLSWDTPPS
MVYTLMTAHWGLPAPNLVVSVVGGEGRTKVKTWVREVLRQGLVKASQSTGAWILTAGLRE
GVGRCVGEAVRDHATAAASISVSKVVALGIAPWGLVHNRQQLVNPQGSFPAKYYVNNTTR
DSCCLDNNYQAFLLVDDGSVGRRGGDMGFRAKLEDYISHQRTGIWGSGSIDIPVLCMLVS
GEASMLERVDLSLKNSMPWLVLAGSGGMADFLSDVLENLSSLPVVQSSNEGDVEAAPSLD
LKDRVAERVKRHFPSEVETDKLVERVLSIYQNRDLITIYHGEQEAPNEFDTVLLKALVGA
SKNRVSVDASPYNEELKLAVTWNRVDIAKSELFNGDIHWRYEDLEDSMTDALINDKPQFV
RLFTENGLNILDYLTYGRLESLYRSVADGTLLYQLLQRHLMERLGTAAPVSTLTNQQGSS
SKVAAEKMQSGPVMEITLFEVSRVLELLMGDVCQPFYFDALGMEQITSKRRALRRVSKLL
RGDCLYREKRCLFPWASLFIWAVLQNRSEMATFFWEMAGESVLSALSGCKILRELSKMET
ETETKVAMKDLAQTFENLAHDLFSSCYRSNESRSFTLLIRKSPVWGGTTCMQMGMGADAR
LFFSNDGVQSLLSQIWWGDMKRNTEVWKLLLTFFCPIICYTNLISFRKHEDQQQEEEGKS
NEDGPGRDSDSLYGTTIFSFSDIKHIEADSQEANSPRSAHIKGVSHRPPKRPFIVSRWRQ
FWFAPVTSFLGNVLMYFLFLLLFAYVLLVDFKPPPPAGPAITEYVLYFWVFTIVCEEIRE
TFFLGTMTWRQRIRVYIQDVWNKCDLTAIILFIIGLICRMFHWSYGFGRDVLCVDYMVFT
LRLIHIFAIHKQLGPKIIIVGKMMKDVFFFLFFLGVWLMAYGVANQALIYSYDPRPDRIF
RRVFYRPYLHIFGQIPVEEMDVGKAWDMPCTDNVTLIQGGAEPCRTMYSNWLVVILLVVY
LLVTNILLINLLIAMFSYTFSEVQANSDIYWKFQRYNLIVQYHSRPSLAPPFIILSHLNL
FIKRTIRKVPSIKIHHFVLQLKGKAANRLMTWETIQKEDFLTAQTKIQKSSDSERLKRMS
AKVDGVLKHVTENRDFDHRLRALENEMEYCSNALSWIVDTLAQSSTFKPPRPPPAVRDVF
PSSSTSTT
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagcacaaggaggagtagtagtaggagtaggaggaggtggcggcggaggcggc
aaaagccataaatcagagaaggaccagagctggatccccaagatcatcaagaagagagtc
tgcagcacctttgttgaggattctctcagtaacggctcactgtgccagtgtggcggggtg
agagatgcacatgcctctgtggctctcagcgactatttcagcacggccatcattaaccac
tgggacagcgcccagcactcttctgagtacccgactgatgcctttggagagctgcagttt
gctggagccagcaagaggcacagctatttcctgcgtttgtcgtgggacacccctccgtcc
atggtgtacactctgatgacagcccactggggcctgcctgcacccaatctggtggtttct
gtcgtgggtggagaaggaaggacaaaggtgaagacatgggtccgggaggtcctcagacag
gggctggtcaaagcctcacaaagcacaggtgcgtggattttgacagcaggcctgcgtgaa
ggtgtggggagatgtgtcggagaggcagtgagggatcacgccactgcagccgcgtccatc
tctgtcagcaaggtggtggcgctgggaattgctccctggggcctggtgcacaaccgacag
cagctggtcaaccctcagggcagctttcctgccaaatactacgtcaacaatacaactcga
gactcctgctgcctggacaacaactaccaagcctttctgctggtggacgatgggagtgtg
ggacgcagaggaggggacatgggcttcagagccaaactggaggactacatctcgcaccaa
cgcacaggcatctggggtagtggcagcattgacatccctgtcctctgtatgctggtttct
ggggaggcgagcatgctggagagagtggatctctctctgaagaactccatgccctggctg
gtgctggccggctcaggaggcatggctgacttcctgagtgatgtcttggagaacctgtcg
tcgttgcctgtggtccagtcctccaatgagggggatgtggaagcggcgcccagtttggat
ttgaaagacagagtggcagagcgggttaaaaggcatttcccttctgaagtggagacagac
aaactagttgaacgagtgctgagtatttaccagaacagagatctgatcacgatctaccat
ggagaacaggaggcaccaaatgagtttgatacagttctgctgaaagcattagttggagct
agtaagaaccgcgtatcagtcgatgcaagcccttacaacgaggagctgaagctggcggtc
acatggaacagggtggacattgccaagagtgaactctttaatggagacatacactggagg
tatgaagacttggaggactcgatgaccgatgccctgatcaacgacaaacctcagtttgtg
cgtctgttcactgagaatggcctcaacatcctggactacctgacctatggcaggctggag
agcctctaccgctctgtggctgatggcacgcttctttaccagctgctacagcgtcacctc
atggagcgtcttggaactgcagcacctgtctccacactaactaaccagcaaggctcgtct
tccaaagtggcagcagagaagatgcagagtgggccagtgatggagatcactctttttgag
gtgtcaagggtgctggaactgttgatgggtgacgtgtgccagccgttctactttgatgct
ttgggcatggaacagatcacatccaagaggagagctctaaggcgggtcagtaagctgctg
cgtggagactgcttgtatcgggagaagcgctgcctcttcccctgggcctcactcttcatc
tgggctgtcctacagaaccgcagcgagatggccactttcttttgggagatggcaggagag
tctgtgctgagtgctttgagtggctgtaagatcctcagagaactgtcaaagatggagact
gaaactgagaccaaagtcgccatgaaagatctagcgcagacctttgagaacttggcacat
gatctgttcagttcttgctatcggagcaatgagagtcgctctttcaccctgctgatcagg
aagtctccagtatgggggggaacaacctgtatgcagatgggcatgggtgccgacgcacga
cttttcttcagtaatgacggcgtacagtctctgttgtctcagatctggtggggtgatatg
aagaggaacacagaggtgtggaagctcctgctcaccttcttctgccccataatctgctac
accaacttaatctctttcaggaaacacgaggaccagcagcaggaggaggaggggaagtct
aatgaggacggaccgggccgagacagcgacagcctctatggcaccaccatcttctctttc
tctgacatcaagcacattgaagcagactcacaagaagcaaacagtccaaggtcagctcac
atcaaaggcgtcagtcacagaccaccgaagcgcccgttcatagtgtcaagatggcgccag
ttttggtttgcacccgtcacctcatttttaggcaacgtcctgatgtacttcctcttcctc
ctgctcttcgcgtacgtgctgttggtggacttcaagcctcctccgcccgcgggtccggcc
atcactgagtatgtgctgtacttctgggtgttcaccatcgtgtgtgaggagatccgggag
acgttctttttgggaactatgacgtggcgtcagaggatcagggtgtacatacaggacgtg
tggaacaagtgtgacctcactgccatcattctgttcatcattggactaatctgcaggatg
ttccactggtcgtatggctttggccgggacgtcctgtgtgtggactacatggtcttcacc
ctccgcctcattcacatctttgccattcacaaacagcttggacccaaaatcatcattgtt
ggcaagatgatgaaggatgttttcttcttcctcttcttcctcggggtgtggctcatggca
tacggagtagccaaccaagctctgatttactcctacgaccctcgtccagatcgcatcttc
cgtcgggttttctacaggccgtacttgcacatttttggacagattcctgtggaagaaatg
gatgtggggaaggcctgggacatgccctgcacagacaatgtcacactgattcaagggggt
gcagagccatgcaggactatgtacagtaactggctggtggtgattctactggtcgtctat
ctgttggtcactaacatcctgctcatcaacctgctcattgctatgttcagctacactttc
tctgaagtgcaggcgaacagcgacatctattggaaattccagcgctacaacctgatagtt
cagtatcactctcgtccctcccttgcccctcctttcatcatcctctctcacctcaatctc
tttatcaagaggaccatccgcaaagtgccctccatcaagatccaccattttgtattgcag
ttaaaaggaaaagcagcaaacaggctaatgacatgggagaccattcagaaggaagatttc
ttgactgcacagaccaagatccaaaaaagcagtgactcagagaggctcaaacggatgtct
gccaaagtcgatggagtgctgaagcatgtgactgaaaacagagactttgatcacagacta
agagctctggagaatgagatggagtactgctcgaatgctctaagctggattgtggataca
ttggcacagagcagcacgttcaaacctccccggcctccacctgcagtaagagatgtcttc
ccttcctcttccacttccaccacctga
DBGET
integrated database retrieval system
