Solea senegalensis (Senegalese sole): 122759969
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Entry
122759969 CDS
T07721
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04530
Tight junction
ssen04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122759969
09142 Cell motility
04810 Regulation of actin cytoskeleton
122759969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122759969
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
122759969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122759969
NCBI-ProteinID:
XP_043870933
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MGNVESQIGDHGLYGNERGYLSRKHMSRSLRISNKQSRRPRHASSGKIEHRNSETSTRSS
STPSIPQSLADHGLEPFNETNILPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMNTMHI
TLPGPTAEEAQEDVYTGEVTYLQKTREGTKETIVFKKKRSKSADMWRDDSLEFSLSDLSQ
EQLTSTEEIIDTANERDLTDCEGNLQSSPTDSTDRANSLEELYRQKSPARRQPHGRYAKW
HNANRAVREGEDDKMLSPSEEDGNSYSAFTLPCRRSHCLSEGLNSHQAAMCASMQGKRAQ
TIQDVTAGEGSEYEDSGIDGVTVEPQHQSRRYKTMSASFSVSSAHGRSMFAGSDSGSSSG
GGPSECVQGVYENFRQELEMSSCQTESVEEAGSALSDEQSTMSSAYQSDPLLSVAQGMVR
KAGRLAVKNFLVHKKNKKVESATKRKWKSYWVSLKGCTLFFYETDGGLGIDNSSIPKHAI
WVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACATAVARQHH
REDTVRLLRAEMKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLEQFH
MDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTETGVR
RRAHAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPTITQVFADGSDSVNQPVDGTHFNPT
TEHRKNEEGTVKSLPRPSTESDIWVPDHLTPSWVCLPNDQPVLAIIQPGESALCVLETIC
KAHQLDPIKHYLRLKFLIENKVQFYIPKPEEDICDLLYKEIELFSKITKVIQFDRDESCM
IGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKASHSLNFSDMKAAF
SKASLALTVNTLPSVDRRQLCYVPPRRSDEEEDLYTDIFSQSQEEILDDGVGLLLESSGD
SLDDDSEIFSEFGCSKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPPATLRQLSDAD
KLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLPEMVEFQVEFL
KTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKA
KTDPDFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYHLDV
AMKAMNKVASHINEMQKIHEEFGAVFDQLITEQSGEKKEVADLSMGDLLLHTSVTWINPP
ASLGKWKKEPQMATFVFKTAVVFVCKDGSKHKKKMGGSHRVSVSADEKDPFRFRHMIPTD
ALQVRSLSNTDGESSAVCEIVHIRSESEGRPERAFQLCCSSPESRKDFLKTVHSVLREKH
RRQLLKTESLPLNQQYVPFGGKRLCALKGARPTINRAASAPTRTLGRRKLVRNRFTIDTD
IVFDVEPEQDSPKEFDSDPLQQEEEKQDQQQPELAGDTDRWVEEQFDLEDYEEREEVKET
DILSDDDDDGEFCQTPGASSAEADLEAPVMALSLESEDTEESESLKSPTDDPATHNMKQS
SVSSDNVEDQKQLEEDEIWIRRNKSISSPDSEINA
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtcgagagtcagattggggaccacggcctctatggtaatgagcgtggctat
ttgtcacgcaaacacatgtcccggtctcttcgcatctccaacaagcagtctagacgccct
cgacatgcctcgtctgggaaaatagagcacagaaactctgagacaagcacgcgctcaagt
agcacccccagcatcccacaatccctagcagaccatggcctggaacccttcaatgagaca
aacatcctcccagactttggaagccccatttgggtggatcgtgtggccatgaacctgcga
cccgtgtccttccacaatgacctggccaatccgtccgtgcacatgaatacaatgcacata
actctacccgggcccaccgcagaggaggcgcaggaggatgtttacacgggggaggtaact
tacctgcagaaaaccagagagggcaccaaagagacaatcgtcttcaaaaagaaaaggtcc
aaatctgcagacatgtggcgggatgacagcctggagttctccctgtcagacctcagccaa
gagcagctgaccagcacagaagaaatcatagacacagccaatgagagagacttaactgac
tgtgagggaaacttgcagtccagccccacagactctacggacagggcaaactctttggaa
gagctgtacaggcagaagagcccagcccgcaggcaaccccatggccgctatgccaagtgg
cacaatgccaacagggctgtcagggagggagaggacgataagatgctttccccatcagag
gaggacggcaacagttacagtgcatttacccttccctgcaggcgttcccactgcctgtct
gaaggcctgaacagccaccaagccgccatgtgtgccagtatgcagggcaagagggcgcag
actatacaggatgtcacagccggggagggcagcgagtacgaggacagcggtatcgatggc
gtgacggtggaaccacagcaccagtccagacgctacaagaccatgtcggcatccttctcc
gtgagctcagcgcacgggaggagcatgttcgccggcagcgacagcggcagcagcagcggc
ggagggcccagcgagtgcgtgcagggcgtctacgagaacttccgccaggagctggagatg
agttcctgccagacggagagtgtggaagaggctgggtctgccttaagtgatgagcagagc
accatgagctccgcctaccagtctgacccgttgctcagtgtcgctcagggaatggtgcgg
aaagctggcaggctcgccgtcaagaacttcctcgtacacaaaaagaacaagaaagtggag
tcggccacaaagcgcaagtggaagagttactgggtttccctcaaaggttgcactctgttc
ttttacgagactgacggcggtttaggtatcgacaacagtagtattcccaaacatgccatc
tgggtcgagaacagtattgttcaggctgtaccagagcatcccaaaaaggactttgtgttc
tgtctcagcaactccctgggagatgcttttctgttccagacctgcagccagacggagctg
gagaactggatcacagccatccactcagcatgtgccactgccgtcgcccgccagcaccac
agagaggacacggtccggctgctgcgcgctgagatgaaaaagcttgagcagaagatcgac
atggacgagaagatgaagaagatgggagacatgcaactgtctgccgtcactgacaccaag
aagagaaagaccatcctggatcaaatcttcctttgggagcagaacctggaacagtttcac
atggatctgttccgcttcaggtgctacctggccagcctgcagggaggagagctgcccaac
ccaaaacgcctcctggcctttgcctcccgccccaccaagctggcaatgggccgactgggc
attttctcagtctcttccttccacgcattggtggcggcacgcacagagactggagtacgg
cgacgggcacatgccatgtctcgctcctgcagcaagcgcaagagcaggttctcctcgctc
tggggtctggacactacctcaaagaaaaagacaaaagcccatcccactatcacccaggtc
tttgctgatggcagcgattcagtgaaccagcctgtagatggcacacattttaatcctact
acagaacacagaaaaaatgaggagggaactgtgaaaagtcttccacggcccagcacagag
agtgacatctgggtccctgaccacctgaccccctcctgggtgtgtctgccaaatgaccag
ccggtactagccatcatccaaccaggggaatctgcactgtgtgttctcgaaaccatctgc
aaggctcaccagctcgaccccatcaagcactacctgcgactcaagttcctgattgaaaac
aaagtgcaattctacatccctaaaccagaggaggacatatgcgacttgctctacaaggaa
attgagctcttctccaagataacaaaagtaatccagtttgacagggatgaatcctgcatg
atcggttacggtttctccatttcagtggtggaggaggatggagtgcagcagctctacatc
actgatgtgaaggcgggtggattagccttcgccaaaggtctaaatgcaggggacgaaatc
ctccagctgaatggaaaagcatcgcacagtctcaacttctctgacatgaaggcggcgttc
tcgaaagcgtcgctggcattgacggtcaacaccctgccttctgtggaccgccgtcagctg
tgctatgtgccaccgcgccgctccgatgaagaggaagatctctacacggacatcttctcc
cagagtcaagaggagatcctggacgacggggtgggtctgttgttggagagctcaggagac
agcctggacgacgactcggagatattcagcgagtttggttgcagcaaaagcacggagcag
gtcgccgctttctgccgcagtctccatgacatgaatccctcggagtgcgtgtcctcgtcg
ccgagcccggactcacccttcccacctcctgcgactcttcggcagctctccgatgccgac
aagctccgcaaagtcatctgcgagcttgtggagactgaacggacctatgttaaagatctc
aattgcctcattggaagatatttgactccactgcagaaggagacctttctcactcaggat
gagctggatgtactctttgggaacttgcccgaaatggtggaattccaagtcgagtttctc
aagaccctggaagatggaactcgactggttccagatctggagaagctggagagagtggac
cagtttaagaaaatcctcttctcccttggtggctctttcctgtactatgcagaccgcttt
aaaatctacagtgctttctgcgccagccacaccaaagtcccaaaggtcctcgttaaggcc
aaaacggaccccgatttcaaggccttcctggatgagcgcaacccgaagcagcagcactct
tccaccctggaatcgtacctaatcaaacccatccagcgggtgctgaagtatccgcttctg
ctgaaggagctctactcgctcacagacccagacagcgaggaacactaccacctggatgtt
gccatgaaagccatgaacaaagtcgccagccacatcaatgagatgcagaagatccatgag
gagtttggggctgtgtttgatcagctcatcactgaacaaagtggcgaaaagaaagaggtt
gccgatttgtccatgggtgacttgttacttcacaccagtgtgacctggatcaatcctcct
gcctccttaggaaaatggaagaaagagcctcaaatggccacatttgtgtttaagactgca
gttgtcttcgtgtgcaaggacgggtccaagcataagaagaaaatgggtggctcccatcga
gtctccgtgtctgcagatgaaaaagaccctttccgattccgtcacatgatcccgactgat
gcccttcaagtcagatccttatctaatacagatggcgagagctctgccgtgtgtgagatt
gtccacataaggtccgagtcggagggacggccagagagagcttttcagctgtgctgcagc
tctccagagagtagaaaagactttctgaaaacggtccattcagtcttgagggaaaagcac
cgccggcagctcctgaaaaccgagagtttacccctcaaccagcagtacgtgccctttgga
ggaaagcgtctctgtgccctgaagggagcccgtcccaccataaatagagcagcatctgct
ccgaccaggactctgggcagaaggaagctcgtgcgcaaccgctttacaatcgacacagat
attgtttttgatgtcgaacctgaacaagactccccaaaggaattcgactcggatccactg
cagcaggaggaggaaaaacaagatcagcagcagcccgagttggcaggtgacacggatcgc
tgggtggaggaacaattcgacctcgaggactatgaggagcgagaggaggtgaaggagacg
gacatcctgagcgacgacgacgacgacggcgagttctgtcagacacccggagcgtcatct
gctgaggccgacctggaggcccccgtcatggctctgtccttggaaagcgaggacacggaa
gaaagcgagagcctcaagtctccaacagatgaccccgcgactcataatatgaagcagagc
agtgtaagcagtgacaacgtggaggatcaaaagcaattggaggaagatgagatttggata
aggaggaataaatccatttcatccccagactctgagataaatgcttga
DBGET
integrated database retrieval system
