Solea senegalensis (Senegalese sole): 122760504
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Entry
122760504 CDS
T07721
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122760504
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122760504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank_4
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
122760504
NCBI-ProteinID:
XP_043871512
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MKRTGPLLTTSRMNHRPQTLYHNSHHVIHTNGPRARSRDNLLMFDDFGDENCCPGRCLSH
SSSERQLLARISAVKRRQALRGPAYMFSTPPIILTEVEQRFLEAAEYGNIPEVRRMLLHV
SNLNVNAVDYMGQNALQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALL
GHPAFRDAHRLTASPAQVDILDDFFAYDEDGTRFSHDVTPVILAAHCQEYEILHTLLSKG
ARIDPPHDYFCSCDSCNYQQQFDSFSHSRSRINAYRGLASPAYLSLFNEDPVLAALELSS
ELAMLANIEKEFKNDYCLLSSQCKDYVVGLLDLCRSTEEVEAILSGEPESEDNDDLPSRP
SLTRLKLAIKYELKKFVAHPNCQQQLLSIWYENLPGLRQQTTAVKLLVVLAVAVGLPGLA
VAYWIAPCGQVGKVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLANMTHHQQPG
STFKSEPLLLHRSTTTPFTWMEILIISWVIGMIWAEVKEIWSQGPGEYLVEPWNFLDFGM
LAIFLASFCCRFSALRHADVAQTYVHSHYTTLVNVTLPPEIHYFTLARIHWLPSDPQLVS
EGLYAVAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNL
YSYYLGAKQNDAFTTLEESFKTLFWAIFGLSEVRSVVINNGHKFIENIGYVLYGVYNVTM
VIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSTLG
LVTCVKSVLLHLVRGHQEDKTETQLNQLGDRNHSGYGSSPGPSRYQKIMKRLIKRYIIKA
QTDRESDEITEGELKEIKQDISSLRYELLEEKSQNQETLDGLLRRLGEISTPS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaccggtccattgttgaccacgtccaggatgaaccacagaccacagactctt
tatcacaacagtcatcatgtgattcataccaacggcccgagggccaggagtcgcgataac
ctgctgatgtttgacgactttggagacgagaactgttgtcctggacgatgtctcagtcac
agcagctcagagcgtcagctcctggctcgtatcagtgcagtcaagcgtcgccaggctctc
cgtggccccgcctacatgttttccacgccccccatcatcctgacggaggtggagcagcgt
ttcctggaggcggccgagtacggaaacatcccagaggtgcgacgcatgctgctgcacgtg
tccaacctgaacgtcaacgccgtggactacatgggccagaatgcactgcagctggctgtg
gccaatgagcatctggaggtgacggaactgctgctggggagggcggacctggccagagtg
ggcgacgccctcctgttagccatcagtaaaggttatgtccggatcacagaggctctgttg
ggtcaccctgcgttcagagacgctcatcgtctcacagcgagtcctgctcaggtggacata
ctggacgacttctttgcttacgatgaggacggaacgagattctctcatgacgtgactcca
gtcattctggcagctcactgtcaggagtacgagatccttcacacgctgctgagtaaaggc
gctcgcatcgatcctcctcatgattacttctgcagctgtgactcctgtaactaccagcag
cagtttgactcctttagtcattcacgctccaggatcaacgcgtacagaggcctggccagt
cctgcgtacctgtccctcttcaacgaagacccggtcctggctgcgctggagctcagcagt
gaactggctatgctggccaacatcgagaaagagtttaagaacgactactgtctcctgtcc
tctcagtgtaaggactacgtggtgggtctcctggatctgtgtcgcagcacagaggaggtg
gaggccattctgagcggagaacctgagtctgaggacaacgatgatctgcccagcaggccg
tcactcacacgactcaaactggccatcaaatatgaactgaagaagtttgtggctcatcct
aactgtcagcagcagttgctcagtatctggtacgagaatcttccgggtctcagacaacag
accactgcggtcaaactgctggtggttctggctgtagctgtaggacttcctggtctggca
gtggcgtactggatcgctccgtgtggccaagtggggaaggtgatgcgcagccccttcatg
aagtttgtggctcacgcctcgtccttcaccatcttcctcggcctccttatccttaacgcc
gccgaccgatttgccggaaccacgctgttggcaaacatgactcaccatcaacagccgggg
tcaacgttcaagagtgagccgctgctgctccaccgctccaccaccactcctttcacctgg
atggagatcctcatcatctcatgggtgattgggatgatctgggctgaggtgaaggagatc
tggagtcagggacctggagagtacctggtggagccgtggaacttcttggactttgggatg
ttggcgatcttcctcgcctccttctgctgccgcttctccgccctgcgtcacgcagacgta
gctcagacttacgtgcactcacactacaccacgctggtgaatgtcacgctgccgcccgag
attcactacttcacgctggcacggatccactggctgccctctgaccctcagctggtgtca
gaaggtctgtacgccgtggcggtggtgctcagcttctctcggatcgcttacatcctcccg
gccaacgagagcttcggtccgctgcagatctctttagggcggacggtcaaagacatcttt
aagttcatggtcattttcatcttggtcttcctggcgttcatgatcggcatgtttaacctg
tactcatattatctgggagccaagcagaacgacgccttcaccaccctggaggagagtttt
aagacgttgttctgggcgatattcggcctctctgaggtcagatctgtcgtcatcaacaac
ggacacaagttcatcgagaacatcggttacgtcctatacggcgtctacaacgtcaccatg
gtgatagtgctgctcaacatgctcatcgccatgatcaacagctccttccaggagatcgag
gacgacgctgacgtggaatggaagtttgctcgagccaaactgtggttctcgtactttgag
gagggacggacgctgcccgtgccctttaacctggttcccagtcctaaatccacgctgggt
ctggtgacgtgtgtcaagtctgtgctgctgcaccttgtgagaggacaccaggaggacaag
acagagacgcagctcaaccagcttggagacagaaatcattcaggatatggttcttctccc
gggccgagcaggtaccagaagatcatgaagcgactgatcaaacgttacatcatcaaagca
cagacagaccgagagagcgatgaaatcactgaaggagaactgaaggagatcaagcaggac
atctccagcctgcgctacgagctgctggaggagaaatcacagaaccaggagacactggac
ggacttctgaggagactgggagagatcagcacgccctcataa
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