Solea senegalensis (Senegalese sole): 122760947
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Entry
122760947 CDS
T07721
Name
(RefSeq) slit homolog 1 protein-like isoform X1
KO
K06838
slit 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ssen00536
]
122760947
Glycosaminoglycan binding proteins [BR:
ssen00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122760947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_2
Laminin_G_1
LRRCT
LRR_1
LRR_14
LRRNT
LRR_9
EGF_TEN
hEGF
EGF_Teneurin
EGF_CA
EGF_MSP1_1
LRR_LRWD1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
122760947
NCBI-ProteinID:
XP_043872080
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MHIYICERSHSLTHSQVLQCCGALQDNSMPAGRRRDGAGSGTVAAPRRAPQSGLWMMLLW
SVVLLLLLLAGGGCAEACPAPCSCLGSTVDCHGLGIHSVPKHVPKGTERLDLNGNNLTVI
TKTDFAGLKHLRVLHLMENQISNIERGAFDDLRELERLRLNKNHLSQIPELLFQKNEALS
RLDLSENAIQAIPRRAFRGATDIKNLQLDKNHISCIEEGAFRALRSLEVLTLNNNNISSI
PVSSFNHMPKLRTFRLHANSLRCDCHLAWLSPWLRQRTALGLYTQCSSPPKLRGLNLAEL
RKSDFACSGNGGSAFVQPCSLASGSCPPMCSCSNNIVDCRGRGLTAIPAHLPEAMTEIRL
EQNGIKSVPPGAFTSYKKLRRIDLSNNQISEIAPDAFHGLKALNSLVLYGNKITELPSGV
FDGLASLELLLLNANKIHCVRATVFKDLENLALLSLYDNKIQSLAKGTFSSLHSIQTLHL
AQNPFVCDCNVKWLADFLRSNPIETSGARCASPRRLANKRIAQIKSSKFRCSAKEQYYIP
GTDDRRQSYECNSKPVCPTKCRCEANVVDCSNLRLTKFPEHLPSSTEELRLNNNDLSVLE
ATGAFKGLSQLSKINLSNNKISDIEDGAFDGASSVGELHLSANHLESVRGSMFKGMEGLR
MLMLRNNRISCIHNGSFTGLTNVRLLSLYDNQLSTILPGAFDTLPNLSTLNLLANPFNCD
CRLSWFGAWLRSKRIVTGNPRCQGPAFLREIPLQDVAVPDFRCEDGSVLEDSSCAAGIQC
PSQCTCMDTVVRCSNKHLQALPRGLSRNVTELYLDGNQFTSVPKELASFKYLQLVDLSNN
KISSLSDDSFSNMSQLTTLILSYNSLQCIPPLALGGLRSLRLLSLHGNDISELQQGIFSD
VASLSHLAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPRGMEGKLLLTTPADKFQC
QGPVEASVQAKCSPCVSSPCQNQGICKPHLTQLFTCTCKTGYSGKHCETPVDACVSNPCT
NGGTCLSDEQTGGFSCACAFGFHGTFCEVNMDDCQEHGCENGATCIDGVGNYTCLCPPNY
TGLLCEEEEGVCSPGRNPCQHQSTCFSSPTGARCVCIPGWVGPNCGIDYNECVDHRCQNG
AQCVDHLDGYSCVCPQGYSGQFCEVALMSPSPCQLARCQNGAPCIEKLGAALCQCLPGFE
GLSCEKLVSVNFVDRDSYVQLQDVKNWPQANITLQVSTAEDNGILLYNGDNEPIAVELHQ
GHVRVTYDPGNQPATAIYSTETVNDGRFHTVELVTFNRMVNLSVDGGEPMTLDSQGRSQL
VPEEAPLYVGGMPEEVMPASLGVSFQSLNTSSFHGCIRNLYINHELQDFTRSHMKPGVVP
GCQACRKLNCLHGVCQPDAAQGPQCHCQTGWTGPHCDQAIAGGLTGVDGVNSCEGSKCVN
GVCVVLDTQTYRCDCKEGYHGALCNLQGEPGGSCQSLQCLHGQCQKTDRGESCVCEQGYT
GKSCDTESPCGAEPVRDYHRLQRGTVLCQTSKTFSWVECRGRCQASSGPSVSAAVAPCCA
PLRLRRRRLTFDCDDGTSFMQDVEKPVECGCKECV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcatatatatatctgtgaaagaagtcactcactcactcactctcaggtcctgcagtgt
tgtggagcgctgcaggataacagcatgcctgctgggagaagaagagatggagccgggtct
gggacggtggcggccccgcgccgggcccctcagtccggactgtggatgatgctgctgtgg
agtgttgtgctgctgctgctgctgctggcaggtggtggatgtgcggaggcgtgccctgcg
ccctgcagctgcctgggcagcacggtggactgtcacggcctgggcatccactccgtaccc
aaacacgtccccaaaggcaccgagaggcttgatctgaatggaaacaacctgacagtcatc
actaagacagacttcgctggcctgaaacacctacgagtgcttcatctgatggagaaccag
atcagtaacattgagagaggagcttttgatgatctgagggagctggagagacttcggctc
aacaagaaccatctgagccaaatcccagagttgctgtttcagaagaacgaagctctgtct
cgactggacctgagtgaaaacgccatccaggccattccacggagggcgttcagaggagcc
acggacatcaaaaaccttcagctggataaaaaccatatcagctgtatagaggagggagcc
ttcagagctctgcgctcactggaagtcctcacgctgaataacaacaacatcagcagtatt
ccagtctccagtttcaaccacatgcccaagctccgcacctttcgtctccatgctaactct
ctgcgctgtgactgtcatctggcctggttgtcaccgtggctgcggcaacggacagcgctg
ggtctctacactcagtgcagctcccctcccaagctgaggggcctcaaccttgccgagctg
cgtaagagtgacttcgcctgctcaggcaatggtggcagcgcctttgttcagccatgcagc
ctggcgtctggctcctgtcctcccatgtgctcctgcagcaacaacatcgtggactgtcgg
gggcggggcctcactgcaatacccgcccacctccctgaggccatgactgagattcgtctg
gagcagaacggcatcaagtcagttcctccaggtgccttcacttcctacaagaagcttcgt
cgaatagacctgagcaacaaccagatctctgaaatcgctccagatgctttccacggcctc
aaagcgctcaattcactggttctgtatggtaataagatcacggagctgcccagcggagtg
tttgatggtctggcctcactggagctgctgctgctcaacgctaacaagatccactgtgtc
agggcaacggtgttcaaagacctggagaacctggctctgctgtcgctgtacgacaacaag
atccagagtctggccaaaggcaccttcagctcactgcacagcatccagacactccacctg
gcccagaacccctttgtgtgcgattgtaatgtgaagtggctggctgacttcctgcggtca
aacccaatagagacgagtggagcccgctgtgccagccctcgccgcctcgccaacaaacgc
atcgcacagatcaaaagcagcaagttccgatgctccgccaaagagcagtactacatccca
ggaacggatgacaggcgtcagagctatgagtgtaacagtaaaccagtgtgtcccaccaaa
tgtcgctgtgaggcaaatgtggttgactgctccaacctccgcctcactaagttccctgaa
catctgccctcctcgaccgaagaactgcgtctcaacaacaatgacctctctgtgctggag
gccaccggtgccttcaagggtctgtcgcagctcagtaaaattaacttgagcaacaacaag
atctcagacattgaggacggagcatttgacggcgcctcgtctgtgggggagcttcaccta
tcagccaatcacctggagtctgtgcgaggcagcatgttcaaaggcatggagggattacgc
atgctgatgctgaggaacaacaggatcagctgtatccataatggcagcttcacgggtctg
accaacgtcaggctgctctccctctacgacaaccagctgagcaccatcctgcccggtgcc
ttcgacacgctgccaaacctgtccacgctaaacctcctggccaacccgtttaactgtgac
tgccgtctgtcctggtttggcgcttggctacgcagcaaacggattgtgacgggaaaccct
cgctgccagggcccagccttcctacgagagatcccgctgcaggacgtggctgtgccagac
ttccgctgcgaggatggctcggtgctggaggacagcagctgtgctgcggggattcagtgt
ccgagccagtgcacctgcatggacacagtcgtccgctgcagcaacaaacacctacaggct
ctgcccagggggctttcccgcaacgtcaccgaactgtatctggatggaaaccagttcacc
agtgttcccaaagagttggcctccttcaagtacctgcagctggtagatctgagcaacaac
aaaatcagctccctgtctgacgactccttttccaacatgagccagctcaccacgctgatc
ctcagttacaactcactacaatgcatccctcctctggcactgggcggcctgcgctcgctg
agactcctctctctccatggcaacgacatctctgagctccagcagggcattttcagtgac
gtggcctccctgtctcacctagcgatcggagccaaccctctgtactgtgactgccgtctg
ctctggctgtcagactgggtgaagagcggctacaaggagcccggcatcgcccgctgtgcc
gggccccgtggcatggagggcaaactgcttctgaccacgcccgccgacaagtttcagtgt
cagggtcctgtagaggcgtctgtccaggccaaatgcagtccgtgtgtgtcctctccctgc
cagaaccagggcatctgcaaacctcacctcacacaactgttcacctgcacctgcaaaact
ggatactcggggaaacactgtgagacaccagtcgacgcttgtgtcagtaatccctgcacc
aacggaggaacctgcctgagtgatgagcagaccggagggttcagttgtgcgtgtgcattt
ggtttccacggcaccttctgtgaggtgaacatggacgactgccaggaacatggatgcgag
aacggcgccacctgcattgacggagttgggaactacacctgcttgtgtcctccaaactac
acaggtctgctttgtgaagaagaggagggagtttgttctccaggtagaaacccctgtcag
catcagtctacctgcttcagctctcctactggtgccaggtgtgtgtgtatccctggctgg
gtggggccaaactgtggcatagattacaacgagtgtgtggatcatcgctgtcagaatgga
gcccagtgcgtcgaccacctagacggctacagctgcgtctgtccacagggatacagtgga
cagttttgtgaggtggccctcatgtctccctcaccctgccagctggctcgctgtcagaac
ggcgccccctgcatagagaagctgggcgcggcgctgtgtcagtgtctgccgggcttcgag
ggtctgagctgtgagaaactggtcagtgtcaactttgtcgacagggactcttatgttcag
cttcaggatgtcaagaactggcctcaggccaacatcacgctgcaggtgtcaactgctgag
gacaatggaatcctgctctataacggagacaacgagcccatcgccgtggagcttcatcag
ggtcacgtcagggtcacgtatgatcctggaaaccagcctgccactgctatctacagcact
gagactgtgaatgatggccgtttccacactgtcgagctggtgaccttcaaccgcatggtg
aacctgtctgtggacggaggagagccaatgactctggacagtcagggccggagccagctg
gtgcctgaggaggcccctctgtatgtgggaggtatgccagaggaggtgatgcctgcttct
ctgggtgtctcatttcagtccctcaacacgtccagtttccatggctgcatcaggaatctg
tacatcaaccacgagctgcaggatttcacccgcagccacatgaagcctggggtggtgccg
ggctgccaggcctgccgcaagctcaactgcctccatggcgtctgccaacctgatgctgca
cagggaccccagtgtcactgtcagacagggtggacgggaccacactgtgaccaggcaata
gcaggaggccttactggggtggatggtgtcaactcttgtgaaggcagcaagtgcgtgaac
ggtgtgtgtgtggtgctggacacacaaacctaccgctgtgactgtaaggagggataccat
ggtgcactctgtaacctgcagggggagccaggcgggtcctgtcagagtctgcagtgcctg
cacggccagtgtcagaagacggacagaggagagagttgcgtctgtgagcagggatacacc
ggcaagagctgtgatacagagtccccgtgtggagctgagccggtaagagattaccaccga
ctgcagcgcggcaccgtcctctgccagacctccaagactttctcgtgggttgaatgtcgc
ggtcggtgccaggcgagcagcgggccgagtgtctctgccgccgtcgccccctgttgtgct
cctctgaggctccgacgtcgacgactcaccttcgactgcgacgacgggacctcattcatg
caggacgtggagaagcctgtggaatgtggctgcaaggagtgtgtgtag
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integrated database retrieval system
