Solea senegalensis (Senegalese sole): 122768130
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Entry
122768130 CDS
T07721
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122768130 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssen01007
]
122768130 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122768130 (iars1)
Enzymes [BR:
ssen01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122768130 (iars1)
Amino acid related enzymes [BR:
ssen01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122768130 (iars1)
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122768130 (iars1)
Prokaryotic type
Other AARSs
122768130 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
122768130
NCBI-ProteinID:
XP_043879821
LinkDB
All DBs
Position
LG4:complement(21358133..21400653)
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPETINFPSEEEKILRFWQDKDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWEVSVTRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACSTPLSNFESNQNYKDVQDPSVIVNFPLVENQDIALIAWTTTPWTLPSNLALCVNP
EFLYVKVKDNTTDKTYIMMEARLGALFKSESEYTLLDKFPGKVLKGKKYVPLFQYFAECG
EKGAFQVVTDNYVKEEEGTGVVHQAPYFGADDHRVCTEYNIIQRDQAPICPVDASGCFTL
EVTDFAGQYVKDADKNIIKWLKEKGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLENNGQCYWVPEFVREKRFGNWLRDARDWAVSRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGVKVTDLHRENIDSLTIPSRLGKGTLRRVTEVFDCWFESGSMPYAQVHY
PFENRKDFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDDILFLYNESTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGENGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLSHLIDPTSFDDKNTSSIHYLMLPQVRESLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKNIQALQKYILEELNVRQLTLSTDKDKYGISLRAEPDHMV
LGKRLKGAFKAVTASIKELTNEQLEVFQKTGSIMVDGHELHEEDLRLMYTFNQSSDSAAQ
YEAHSDAQVLVLLDVSPDQSMVDEGVAREVINRIQKLRKKAHLVPSDEINVYYHCQPEGE
YLHSVIQAHTDFILATIKAPLLPFPVPNTASVIIQEKTQLKGSDLEFIIVKGSSGSRVSL
NGPACSYVNLRVKVNNKEQDGVVLLENPKGDNRLDVDKLKRVCSSIFGTNNTQLRFFSGG
TELTSKMDLQALSGKTLSVTSGSIPPGPVPSSDALLCPYVNLLLCNAQPAECQTGEVGTL
LLVNPVGQNGLDYSGLISEAAKVFGLRSRWLKLYLDQDLTQELPADTSAKSLDTKTLFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagtcccggagaccatcaactttccctctgaggaggagaagatcttgcgc
ttttggcaagacaaggactgttttcaggaatgcctcaaacagtccaaaaacaggcccagg
tacaccttctatgatggccctccctttgccacaggtctaccccactatggtcacattctt
gctggcaccatcaaggacattgttacccgctttgcccatcagagtggcttccatgttgac
cgacggtttggctgggattgccatggattgcctgtggagtatgagattgataagaccttg
ggtatcaaagggcctgaagatgtggccaagatgggcatcgctgagtacaacaagcagtgc
agaaacattgtcatgagatactccaatgagtgggaggtttcagtgacacgaatgggcagg
tggattgacttcaaaaatgactacaagactctgtacccatggttcatggagactgtctgg
tgggtgttcaaacagctgtatgacaagggtctggtgtaccgaggtgtcaaagtgatgccc
ttctccactgcctgcagcacccctctctctaactttgagtccaaccagaactacaaggat
gtccaggatccctctgtgatcgttaattttccgctggttgagaatcaagatattgctttg
attgcatggacgaccacaccctggacactgccaagcaacctggctctctgtgtcaaccca
gagttcttgtatgtcaaagtcaaagataacaccactgacaagacctacatcatgatggag
gccaggcttggagctctgtttaagtcagagagcgagtacacactgttggacaaatttcct
ggtaaggtgctaaaagggaagaaatatgtgcctctcttccaatactttgccgagtgtggg
gagaaaggagcattccaggtggtgacggataactatgtcaaggaggaggagggcacagga
gtggtccatcaggcaccttactttggagctgatgatcacagggtttgcactgaatacaac
atcatccagagggaccaggctcctatctgtcctgtggatgcctcaggctgcttcacattg
gaggtcactgactttgctggacagtatgtcaaagatgctgacaagaacatcatcaaatgg
ctgaaggagaagggccgccttgtcaatgccagcagtttcaaacatagttaccccttctgc
tggaggtccgacacacccctgatctacaaagctgtcccaagctggtttgtccgagtggag
cacatggtggacaaactgctggaaaacaatggacaatgctactgggttccagagtttgtg
cgtgagaagcgttttgggaattggctgagagacgcacgtgactgggcagtttcaaggaac
cgttactgggggacgccaatcccactctgggtcagcgatgattttgaggaggtggtgtgt
gttgggtctatggctgaactggaggaactgactggggtcaaagtaactgatcttcatcgg
gagaacattgacagtctgacaatcccgtcccggctcggtaagggcacactgcggagggtc
acggaggtgtttgactgctggtttgagagtggcagcatgccgtacgcccaggtccactac
ccttttgaaaacaggaaggactttgaggacactttccctgcagacttcatcgctgagggc
attgaccagacaaggggatggttctacactttgttggtgctctccacagccttgtttggc
aaaccacccttcaagaatgtcatcgttaatggtttggtccttgccagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccagggctgatagtacagaactatggagct
gatgccctcagactgtacctcatcaactctcctgtagtgagggcagagaatctacgtttc
aaagaggacggtgtgcgagatgtgttgaaagatgtcttcctgccgtggtataacgcctat
cgctttctggtgcagaacgtacagaggttgcagaaggaggatgatattctgtttctgtac
aatgaaagcacagcaaagcagagcgacaacatcatggacaaatggattcagtccttcaca
cagtctctcattcagttcttcaaggctgagatggatgcttaccgactttacactgtcgtg
cctcgcctggtcaagtttgtggacatgctcaccaactggtacgtgagaaccaacagacgc
cgtctgaagggagagaatggcaccgaggactgcctgtgggcgctggaaaccctcttcagc
gttctgttttccatgtgcaggctgatggctccattcacacccttcattacagagatgatg
taccaaaatctgagtcacctcattgaccccacctcttttgacgacaagaacaccagcagc
atccactatctcatgctgccccaagtcagggagagtttaattgacaagcgcattgagagt
gccgtctctcagatgcagtctgtgattgaactgggcagagtgatcagagacaggaagacc
ctgcctgtcaagtacccactgaaggaggttgtagttattcaccaggatccagaggctctg
aaaaatatccaggccctgcagaaatacatcctggaagagctgaacgtgcgacagttaact
ctgtcaacggacaaggacaagtatggaatcagtctgcgtgctgagcctgaccacatggtg
ttgggcaagagactaaagggagccttcaaagcggtcactgcttcaatcaaggaactcacc
aacgagcagcttgaggtctttcagaagacaggatccatcatggtagatggccatgagctc
cacgaggaggacctgaggctgatgtacactttcaaccagagctcggactcagctgcacag
tatgaagcgcactctgacgcacaggtcttggtgctgttagatgtctccccagaccagtcc
atggtagatgaaggcgttgcccgagaagtcatcaaccgcattcagaaactacgcaagaag
gcccacttggtgccatcagatgagataaatgtgtactaccactgccagccagagggggag
tacttgcactctgtcatccaggctcacacagacttcatcttagctaccatcaaggctcca
ctgctgcccttccctgttcccaacactgccagtgttatcatacaggaaaagactcagctg
aagggctcagacttggagtttatcattgtaaagggatcctcaggttctcgggtctctcta
aatggaccggcttgcagctacgtgaacctcagggtgaaggtcaacaacaaagaacaagat
ggtgtggtgctgctggaaaaccccaaaggagataacagactcgatgtggacaagctgaag
agagtgtgcagcagcatctttggaacaaataacacccagctcagattcttcagtggtgga
actgaattgaccagtaaaatggacctccaggctttgagtggtaaaacgttgtcagtcact
tcaggctccataccccctggccctgtcccctcctccgacgccctcctgtgtccatatgtg
aacctgctgctctgcaacgcacagccagctgaatgccagacaggagaggttggcaccctt
ctactggtgaatccagtgggccagaatgggcttgactactcaggccttatatctgaggcg
gccaaggttttcggccttcgcagcagatggcttaaactctacctggaccaggacctcacc
caggagctgccagctgatacatctgcaaaatctctagacaccaaaactttgtttgtgaga
gttcttccaacaactgctgaagcataa
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integrated database retrieval system
