Solea senegalensis (Senegalese sole): 122768765
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Entry
122768765 CDS
T07721
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122768765 (pkp1b)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122768765 (pkp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Nipped-B_C
ARMC9_ARM
DUF383
Motif
Other DBs
NCBI-GeneID:
122768765
NCBI-ProteinID:
XP_043880913
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All DBs
Position
LG4:16433214..16443007
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AA seq
712 aa
AA seq
DB search
MTSQDPLKSVISIGNVDDTSLAVPSAHQCRSGQQRVLEQVQTIRRTRSRHSSSGRSASTS
LTPTSPGYEPVFVEPLKSQSSTSNGSVFFANGFNKTLTVEKNMKQQVINTAKESTAKRNL
AFSTHHYERNYAPTGSKPSRSEPDLVRQRSVPAPKRSVPLQRFLSNRGTHNTERPSSMFV
TPPKGHAQYAVNGFINSKTTSQVKYSEVDGSKSKRLPMQTQREHGTNGSGGVVDLTMKEA
VECLSSTNEVYQHCGASYIQHNAFIDDGAKEEVLKVKGISPLVALLRSPNSQVSHTASAA
LRNLSFKSNTSKEAIHHSSGIEETVALLQQTDSVEIQKQLTGLLWNLSSADNLKPDLLKS
ALPVVMERVILPYNSNSHDPEVFYHSTGFLRNLSSAKQNNRQVMRKCRGLVDSLVGYVKE
CVEAGNPDDKSVENCVCILHNLTFQLEDEAPALFSRITALAKTVDRSNSQGDNGPIGCFS
PQNKSSEQEHHFDYPVVEDSQPSGAGLLFHSKTMQSYLNLLESSQQADTQEACCGALQNL
TAHEGIVSKVMSQTIVQKLNGMQVISPLLRSNKVNLQKNIVALVGNLTKNPNLHNTIARK
ALPELLDIITAGTKGGNESDDTLSMTCQAANCLLMKEPEIGKHLIKGNLIKSLNDLSQNN
YFPKSSKAASLLLHNLWSEKDLQGFLKKLGMTKSTFINDTIASALKSVQVVD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcaggatccgctgaaatccgtcatttccatcggaaatgtggacgacacgtct
ctggctgtgccgtccgctcaccagtgcagatccggacaacagcgcgtcctggagcaagtg
caaacgatccggaggacgaggtcgagacattccagcagcggcaggagcgcatccacctca
ctgacccccacaagtcctggatacgagcctgtgtttgtggagcctctcaagtctcagtcg
agcacgtctaatggaagcgttttcttcgcaaatggcttcaataaaacgctcaccgttgag
aagaacatgaaacagcaagtcatcaacaccgccaaggaatccaccgctaagaggaattta
gcattttctacccatcactacgagaggaattacgcccccaccggctcaaagcccagccgc
agcgagcccgatttggtccggcagcgctcggtgccagcgccgaaacgctccgttccattg
cagagattcctctccaacagaggaacccacaacacagagaggcccagcagtatgtttgta
actcctcccaaaggtcacgctcagtacgctgtgaatggcttcatcaactccaaaacaacc
agccaggtcaaatacagtgaagtagatggatccaagtccaaaaggcttcccatgcaaacc
caaagagagcatggcacaaacgggagcggtggtgttgtagatctcactatgaaggaggct
gtggagtgtctctccagcaccaatgaggtgtatcagcactgcggcgcgtcctacattcag
cacaacgccttcattgacgacggggcaaaggaggaggtgttaaaggtgaaggggatctct
cctctggtggctctgctgcgcagccccaactcgcaagtgagccacaccgcctcggccgcc
ctccgtaacctgtcctttaaaagtaacaccagcaaggaggcgatacatcacagcagcggc
atcgaggagactgtggctctgctccaacaaacggactctgtggagatacagaagcagctg
acaggtcttctgtggaatttgtcgtctgcggacaatctgaagccagacctgctaaagagc
gcgctgcctgtcgtcatggagcgcgtcattctgccttacaacagcaacagccacgacccc
gaagtcttctaccactccaccggatttctaagaaacctcagcagcgcaaagcaaaacaac
cgacaggtgatgagaaagtgtcgcggtttggtcgactctttggtcggttatgtcaaagaa
tgtgtggaagcgggaaacccagatgataagtctgtggaaaactgcgtgtgcatcctgcac
aacctgactttccagctggaggacgaggctccggctctgttcagcagaatcacggctttg
gccaagacggtggacaggagcaacagccagggcgacaatggccccatcggctgcttcagt
ccacagaacaaatcttcagagcaagagcatcactttgactacccggtcgttgaggattct
cagccgagcggagctggcttgctcttccactccaagactatgcagagttacttgaatttg
cttgagtctagccagcaggctgacacacaggaagcatgttgtggagcgctgcagaacctc
accgcacatgaaggcattgtctccaaggtcatgagccagaccattgtgcagaaactgaat
ggcatgcaggttatcagtccccttttgaggtcaaacaaagtcaacttacagaagaacatt
gtggctttagtaggaaacttgaccaagaacccaaaccttcacaataccatagctcgtaaa
gctctccctgagctgctggacatcatcaccgccggcaccaagggagggaatgagtctgat
gacactttgtccatgacctgccaggctgccaactgcctgctgatgaaggagcctgagatt
ggcaaacatctgataaaaggcaacctgataaagtcactgaatgatctcagccaaaacaac
tatttccccaaatccagcaaggctgcatccctgctccttcacaacctgtggtcagaaaag
gatttacaaggcttcttgaaaaagctagggatgactaagtccacgttcataaatgacacc
atcgcatcggcactgaagtcggttcaagtggtcgattaa
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