Solea senegalensis (Senegalese sole): 122769156
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Entry
122769156 CDS
T07721
Symbol
dhx9
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122769156 (dhx9)
03012 Translation factors [BR:
ssen03012
]
122769156 (dhx9)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122769156 (dhx9)
5.6.2.6 RNA 3'-5' helicase
122769156 (dhx9)
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122769156 (dhx9)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122769156 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
AAA_19
ResIII
AAA_14
Motif
Other DBs
NCBI-GeneID:
122769156
NCBI-ProteinID:
XP_043881415
LinkDB
All DBs
Position
LG1:complement(20210659..20235979)
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AA seq
1270 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPTYDIRAAGNKNRPKFMCEVRVDGFNYIGMGNSTNKKDAQSN
AARDFVNYLVRVGEIGSAEVPALGACPPVPDQPDRAGSGGFGSLPSGGPLPPHLVVKAEQ
DNGDKSGLVPGVTGLGYSGGGASGWGGGGGGGGDGDGAQWDRGANLKEYYARRDEQEAQA
TLESEEVDLNANLHGNWTLENAKARLNQFFQKEKINTEYKYSQVGPDHNRSFIAEMQLFV
KQLGRRITAREHGSNKKLAAQSCALSLVRQLYHLGVVEPYSGVTKKKEGETLEPFDVSVS
PELQQQLLSVVQELGVHIPPPPTDSSSPVSLVQGKISTFEPSQRQSGAGVVPWSPPQVNW
NPWTSSNIDEGPLAFCTPEQISEDLQEELMMQLKHDEDLHKVLVDRDQLPVKQFEEEILA
TVDSSPVVIIRGATGCGKTTQVPQYILDRFIKGGRASHCNIVVTQPRRISAVSVAERVAY
ERGEELGNSCGYSVRFESVLPRPHASVLFCTVGVLLRKLEAGIRGISHVIVDEIHERDIN
TDFLMVVLRDVVQTYPEVRVILMSATINTSMFREYFFNCPVIEVFGRTFPVQEYFLEDCI
QMTNFIPPPMERKKRDKDEEAGDEDTNCNLICGPDYTPETKRSMAQMTEKEMSFELVEAL
LKYVETLQVNGAVLVFLPGWNLIYSMQRHLETNPHFGSNRYRILPLHSQIPREEQRRVFE
PVPENIRKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQ
RKGRAGRVRPGFCFHLCSHARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKA
IEPPPLDAVIEAEHTLKDLDALDSNDELTPLGRVLARLPIEPRLGKMMIMGCIFHLGDAM
CTISAASCFPEPFVSEGKRLSFVHRNFAGTRFSDHVALLSVFQAWDDVRINGEEAESRFC
DHKRLNMSTLRMMWEAKVQLKDILVNAGFPEESLLTHSFNVVGPDNSLDVVISLLTFGFY
PNVCFHKEKRKILTTEGRNALVHKSSVNCPFSSHDVSYPSPFFVFGEKIRTRAVSAKGMT
MVSPLQLLLFGCKKVNSEGDVVELDDWIKLRIPHEVGGAIVALRAGLEALVVEVTKDPEY
VRQMDQNNERLLNVIRHVSKPSAAGLDMMSSMQRMGDGPRPPKMGRFESGGGGGYGGGGG
GYRGGXGGYRGGGGGYRGGGGYAGGGGGYRGGGGYGGRGGYRGGGGYGGSGGGYRGGGAY
RRGGGYRGGY
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggcagacataaagaacttcctgtacgcctggtgtgggaagaagaagctcacacccacc
tacgacatccgagcggcgggaaacaaaaaccggcctaagtttatgtgcgaggtgagagtg
gatggattcaactacatcgggatgggaaactccaccaacaagaaggacgcgcagagcaat
gccgcccgcgactttgtcaactatctggtccgagttggagaaattggctcagcagaggtt
cctgctctgggggcgtgtcctcctgtccctgatcagcccgacagagcaggaagtggaggc
tttggaagcctgccctctggtggtccactgcccccacaccttgtggtcaaagctgaacaa
gataatggtgacaaaagtggactggtcccaggagtgactggtctgggttattcaggaggc
ggagcctctggttggggaggaggaggaggaggaggaggagacggagacggggctcagtgg
gacagaggggcaaatctgaaggaatactacgccaggagagatgaacaggaagctcaggcg
acccttgagtcagaggaggtggacctgaatgctaatctccacggcaactggactctggag
aatgccaaggcccgactcaaccagttcttccagaaggagaaaatcaatactgagtataaa
tacagccaagtgggaccggaccacaacaggagcttcatcgctgagatgcagctgtttgtg
aaacaactcggcagaaggatcacggcacgagaacacggctctaataagaagctggcggca
cagtcgtgcgcgctgtctctggtgcgacagctctatcacctgggagtcgtggagccgtac
tctggagtcaccaagaagaaagagggcgagacgctggagccgtttgacgtcagtgtgagt
ccagagcttcagcagcagctgctcagtgtcgtccaggagctcggagtccacatcccacca
ccgcccacagactccagcagcccagtgtctctggttcaggggaagatatcgacctttgaa
ccgtcacagagacagagtggagctggagtggttccctggtctccacctcaggtcaactgg
aatccctggaccagcagcaacatcgatgagggacctctggccttttgcactccagagcag
atcagtgaagacctgcaggaagagctgatgatgcagctgaaacatgacgaagatctgcac
aaggtcctggtggacagggaccagttgccggtcaaacaatttgaagaggagatcctggcg
acagtggacagcagtcctgtggtcatcatcagaggagccacaggctgtggtaaaaccacg
caggtacctcagtacatcctggaccgcttcatcaaaggaggacgagcgtcccactgtaac
atcgtggtcacccagcccagacggatcagtgccgtgtctgtggccgaaagagtcgcctac
gagagaggggaggagcttgggaatagctgcggctacagtgtccgcttcgagtccgtcctc
ccacgtcctcacgccagcgtcctcttctgcaccgtcggtgttctgttgaggaaacttgaa
gcaggaatccgaggcatcagtcacgtcatcgttgacgagattcacgagagggacatcaac
acggacttcctgatggttgtcctcagagacgtggtccagacttaccccgaggtccgtgtc
atcctcatgtcggccaccatcaacacctccatgttcagagaatactttttcaactgtccc
gtcatcgaggtgtttggacgaacattccctgttcaagagtattttctggaagattgtatc
cagatgaccaacttcattcctccaccaatggaaagaaagaaaagagacaaagacgaggag
gcgggagatgaagataccaactgtaacttaatctgtgggccggattacacgcctgagacc
aagcgatcaatggctcagatgaccgagaaggagatgtccttcgagctggtggaggctctt
ctcaaatacgtggagacgctgcaggtcaacggagctgtactggtctttctgccgggctgg
aacctcatctactccatgcagagacacctagagaccaacccacactttggaagtaaccgg
taccggattctgccgctccactcacagattccccgagaggagcagaggagggtgtttgaa
cccgttcctgaaaacatcaggaaggtgattctatcgacaaacatcgcagagacgagcatc
accatcaatgacgttgtctacgtcattgactcctgcaagcagaaggtcaaactctttacg
tcccacaacaacatgaccaactatgccaccgtgtgggcgtccaagaccaacctggagcag
aggaaaggacgagccgggagagtccggcccgggttctgcttccacctctgtagccacgcc
cgctttgagaaactggagactcacatgactccagagatcttcaggactccactgcatgaa
gtcgctctgagcatcaaactgctgagactcggcgccatcggacacttcctgtccaaggcc
atcgagccaccgccactggacgccgtcatcgaggcggaacacaccctgaaagacctggac
gctctggactctaacgatgagctgacccctctgggtcgggttctggctcgtctgcccatc
gagcctcgtctggggaagatgatgatcatgggctgcatcttccatctgggtgatgccatg
tgcaccatctcagctgcttcctgtttcccggagccgttcgtcagtgagggcaaacgtctc
agcttcgtccacagaaactttgccggcactcgtttctctgaccacgtggctttgctgtcc
gtgtttcaggcctgggatgatgtcaggatcaacggagaggaggcggagtctcgtttctgt
gaccacaaacgtctgaacatgtccactctgaggatgatgtgggaggccaaggtacagctg
aaggacatcctggttaatgctggctttcctgaagagtctctgcttactcactcatttaac
gtggtcggccctgacaacagtctggacgtggtcatttctctgttgacctttggcttttat
ccaaacgtgtgtttccacaaagagaagaggaagatcttaaccacagagggacggaacgcc
ctcgttcacaagtcctcggtcaactgtccattcagtagccacgatgtctcctacccctca
cccttctttgtctttggagagaagatcaggactcgtgcagtctcagctaaaggaatgaca
atggtcagtcctcttcagcttcttctgtttggctgcaagaaagtgaactctgaaggagat
gtggtggagctggacgactggatcaaactgaggattcctcatgaggtgggcggggccatt
gtggctctgagggcgggacttgaggctctggtggtggaagtgaccaaagatccagaatat
gtgagacaaatggaccaaaacaacgagagactcctgaacgtcatcagacacgtgtccaag
ccgtctgcagccggactcgacatgatgagcagcatgcagaggatgggagacggtcctcgt
cccccgaagatgggacgcttcgagagtggaggagggggaggttatgggggagggggaggt
ggctacagaggagganggggaggctataggggtgggggaggtggctacagaggaggggga
ggatatgcaggagggggcggtggctacagaggaggtgggggatatggaggaagaggaggg
tacagaggaggcggcggatatggagggagtggaggaggttatagaggaggtggggcctac
agaaggggaggaggctacagaggaggttattaa
DBGET
integrated database retrieval system
