Solea senegalensis (Senegalese sole): 122773429
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Entry
122773429 CDS
T07721
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04217
Necroptosis
ssen04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122773429 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122773429 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122773429 (sharpin)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
122773429 (sharpin)
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
CATSPERB_Ig-like
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122773429
NCBI-ProteinID:
XP_043888061
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Position
LG1:complement(14106667..14114394)
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AA seq
438 aa
AA seq
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MALSSGGWAPPAPVPASSQQAVCGGPTPTACCTTVLMSVRVSVCHSGIRPLCLPGAGSET
LRLQLSMDPIRAGEFRLALRDTSGNRCVFIAEFDLRAVQYEVKSPRCHEMRYAAPPHDCI
RFNFRCDREAEEWATVVMSSLREAHRVANINTYESDGKQNHTAAALERWSSASLPLTEEL
CLELARAIEAGDTQAASQHASALARQKAVLTIQLSEKNYADGEISLSVVVEDVSSSCCVT
VKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDTAYLYLIS
ARQARVTRQLFQQDLESSLLAPPLPPGNGPTSQDWRAYSTLPSRLSHDNQGSTSGGCDRP
GDIKDVLNLENLRLNDHTNKASKTQQTEWACPSCTFINKMSRPGCEICATARPDTHTLQD
KGRREDRGESGLSGGSSS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcgggcggttgggctcctccagccccggtccctgcctcgtcacagcaa
gctgtatgcggcgggcctacgccaacagcgtgttgcactactgttctcatgtcggtccgt
gtttctgtgtgtcattccgggatacgacccttgtgcctccccggtgcaggcagcgagact
ctgcgcctccagctcagcatggacccgatccgggccggagagttcagactggcgctgcga
gatacgagcggaaaccgctgtgtgttcattgctgagtttgacctgcgcgctgttcagtat
gaagtcaagtcacctcgctgccatgagatgcgttatgcggctccacctcacgactgcatt
cgcttcaacttccgctgcgaccgcgaggctgaggagtgggccacagtggtgatgtcatcg
ctcagagaggcacatagagttgcaaatataaacacgtacgaatccgatggaaaacagaat
cacacggcagcagctctggagcggtggagttcagcctcactgccactcaccgaagagctg
tgcttggagctcgccagggcaatcgaagcaggtgacactcaagctgcttcccagcatgca
tctgctctggctcgacagaaagcagtgctgacaattcagctgtcggagaagaactacgct
gacggggagattagtttatctgtagtagtggaggatgtgtcatcttcctgttgtgtcaca
gtgaaagtgtttccgtacatgacagtggctgctctcaagcaacaggttttcctcgagtac
ggtttccaccctcgcgtgcagcgctgggtgatcggtcagtgtttgtgcacagagccgagg
tcgttggcatcgtacggtgtgcagaaggacggtgacacggcgtacctctacctgatctct
gcccggcaggcccgcgtcactcgccagcttttccagcaggacctggagagttctctcctc
gccccacctctccccccgggcaatggacccacctcgcaagattggagggcttacagcact
ctgccctcaaggctatcgcacgacaaccaggggagcacaagtggaggttgtgacagacca
ggtgacatcaaagatgtcctcaacttagagaacttgagacttaatgatcacaccaacaaa
gccagtaaaacccagcagacagagtgggcttgtccctcatgcactttcatcaacaaaatg
tctcgtccgggctgtgagatctgtgccacagccagacccgacacacacaccctgcaggac
aaaggaaggagagaggaccgcggtgagtccggtttaagcggcggcagcagcagctga
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