Solea senegalensis (Senegalese sole): 122775083
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Entry
122775083 CDS
T07721
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04145
Phagosome
ssen04514
Cell adhesion molecules
ssen04672
Intestinal immune network for IgA production
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122775083
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122775083
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122775083
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122775083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122775083
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122775083
Exosomal proteins of epithelial cells
122775083
Exosomal proteins of breast milk
122775083
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
Ig_3
DUF7550
Motif
Other DBs
NCBI-GeneID:
122775083
NCBI-ProteinID:
XP_043890747
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All DBs
Position
LG9:18750121..18754890
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AA seq
259 aa
AA seq
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MFSRGFFLRLCVYLLFSKTEAYYGYGLIRCQTTSSSDIFYLEQIYFNKKLVAQYNGTLGK
FEGYTNYAKEIADQLNKNQAFLKQEKKNEMKCTSNAPLMDVLLSKTVEPSVRLQSVEAVD
SRHPVMLACSVYNFYPKVIKVTWLKDGQTVTSDVTTTDELPNGNWLYQMHSHLEYTPTPG
ERITCKVEHASFSEPKLYHWDPMSESQREKIAVGAAGLVLGVVILLAGAFYYYMNKPGRE
LVPTNDVNTCNPNPERTEE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcgcggcttctttttacggctgtgtgtatatctattattttcaaaaacagaa
gcttactatggctatggtttaatacgttgccagactacttcttcttctgatatcttttat
ctggaacaaatctactttaacaagaagttagttgcccagtacaacggcaccttgggaaaa
tttgagggctacacaaactatgcaaaggaaattgccgaccaactcaacaaaaaccaagcg
tttttgaaacaagaaaaaaagaatgaaatgaaatgcacaagtaatgcacctctgatggac
gttttgctttcaaaaacagttgagcccagtgtcaggctgcagtctgttgaggcagtggac
agcagacatcctgtcatgcttgcatgcagtgtgtacaacttttatcccaaagtaatcaaa
gtaacgtggctgaaggatggacagacagtgacatctgatgtgacgaccactgatgagctg
cccaacgggaactggctctaccaaatgcattcccatctggagtatacgcccacacctgga
gagagaatcacctgtaaagtggagcatgccagcttcagcgagcccaaactttatcactgg
gaccccatgtctgagtcgcagagggaaaagattgccgttggggcagcagggcttgtgctg
ggtgttgtcattttacttgctggggccttttactactacatgaacaaacctggtcgagag
ttagtgccaacaaatgatgtaaatacttgtaaccccaaccctgaaaggacagaggaataa
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