KEGG   Solea senegalensis (Senegalese sole): 122775088
Entry
122775088         CDS       T07721                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04145  Phagosome
ssen04514  Cell adhesion molecules
ssen04672  Intestinal immune network for IgA production
ssen05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    122775088
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122775088
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    122775088
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122775088
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssen04147]
    122775088
Exosome [BR:ssen04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122775088
  Exosomal proteins of epithelial cells
   122775088
  Exosomal proteins of breast milk
   122775088
SSDB
Motif
Pfam: C1-set MHC_II_alpha ig Ig_3 Ig_2 SurA_N_2 C2-set_2
Other DBs
NCBI-GeneID: 122775088
NCBI-ProteinID: XP_043890753
LinkDB
Position
LG9:18742649..18744241
AA seq 248 aa
MMSSSSMKHSAVIILILNSLCTFSHVVHEFITIAGCSNKDNTVVQVEVDGDEILYTDFEK
EEFVFTVPKFITSDPTEATKEMAEYRNAKKYQRACPPAVLLFTEEERHPPEQKDAPETMV
YAADEVQLGVENTLICFVNHFYPPFIEVTWTKNGQTVTEGVSLGRYYPNNELTFHQLSTL
TFTPDVGDIYSCTVEHLSLERPDTKFWEPDFGHQSHGPDILCWLGLTFAFLGVAGGTFLF
VKGHHVRG
NT seq 747 nt   +upstreamnt  +downstreamnt
atgatgtccagctcaagcatgaagcactcggctgttataatcctgatacttaacagtctc
tgcactttttcacatgtggtccatgaatttatcaccatagcaggctgctctaacaaagac
aacactgtggtgcaggttgaagttgatggtgatgagattttgtatacagattttgaaaag
gaggaatttgttttcactgtgcccaaatttataacgtcagacccgactgaagcaactaag
gagatggctgaatatagaaatgctaagaaataccagagggcatgtccaccagctgttttg
ttattcacagaagaggagagacatccaccagaacagaaagatgctcctgagaccatggtc
tatgctgcagatgaagttcagttaggagttgaaaacacactcatctgctttgtgaatcat
ttctacccacctttcatcgaagtcacctggactaaaaatggtcagacagtaacagaggga
gtgtctcttgggcgatattaccccaacaatgagctgactttccaccagttatccacattg
acgttcacacctgatgtgggggacatttacagctgcacagtggagcacttatctctggag
aggcctgatacaaaattctgggaacctgatttcggtcatcaaagtcatggaccagacatt
ctctgttggttgggtctgacatttgcctttctgggtgtagcaggaggaacatttttgttt
gtaaaagggcatcatgtaaggggatga

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