Solea senegalensis (Senegalese sole): 122776349
Help
Entry
122776349 CDS
T07721
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122776349 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122776349 (tdg.2)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
122776349 (tdg.2)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122776349 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
Motif
Other DBs
NCBI-GeneID:
122776349
NCBI-ProteinID:
XP_043892768
LinkDB
All DBs
Position
LG10:9139891..9146288
Genome browser
AA seq
407 aa
AA seq
DB search
MEENHYTSSLTVPTDYFQQWYQSSQQHPEAQHVMPYHNMGYHTEGPRDEPVMAELSVHRE
PSFYQEPFYQNCQPAQNHYHEQMYPQNVTEQQQNLTTLHHPQHAIQQQELSIQHQPQPAG
PPQVVTPVKKKRGRPPKQQAEEGEMPDEEEDEAEAAKKAKRALNRFNGMTVAEVMARTLP
DVITFNLDILIIGINPGLMSAYKGHHYPNPGNHFWKCLFLAGLTDEQLSYMHDQSLPENY
SIGFTNMVERTTPGSKDLSSKEIREGGRQLLEKLKKYKPLIAAFNGKGIYEIFCKETFGV
KAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKELRDQIKGLVPR
DEVEETRYSFDLQLAKEDAKRIAIKEEQVDPEYERGGGVRQSNNVPN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaccactacacgtcgtcactgacggttcctacggattattttcagcagtgg
taccagtccagccagcagcatcctgaggcacagcatgttatgccatatcacaacatgggc
tatcacacagagggtcctagagatgagcctgtcatggctgagctgtccgtccaccgggag
ccgtctttttaccaggaacctttttaccagaactgccaaccagcccagaatcactatcac
gagcaaatgtacccccagaatgtcacagagcaacagcagaatcttacaactctgcaccac
cctcaacatgcgatacagcagcaggagctgagcatccagcaccagcctcagcctgctggt
ccacctcaagttgtgacaccagtgaagaaaaagagaggccggcctccgaaacagcaagcc
gaggagggcgagatgccagacgaggaggaggatgaggctgaggccgccaagaaggcgaag
agggctctcaatcgcttcaacggcatgacggtggctgaggttatggccagaaccttgcca
gatgttattaccttcaatcttgatattttgataattggaattaatccaggactaatgtca
gcctacaaaggacaccattacccaaacccaggaaaccatttctggaaatgtctgtttctt
gctggtctaactgacgagcagctcagctacatgcacgaccaaagcctgccagagaattac
agcatcggcttcaccaacatggtagaaaggaccacacctggcagcaaggacctttccagt
aaggagattcgtgaaggaggtcggcagttactggaaaagctgaagaaatacaagcctctg
atagcagcttttaatggcaaaggtatttatgaaatattctgcaaagaaacctttggtgtg
aaggcaaagaatcttgagtttggtctgcagccctacaaaatcccagaaactgaaacggtg
tgctacttgatgccctcatcaagccctcgctgtgctcagtttccccgcgcacaggataag
gtccatttctacatcaagctgaaggaactgagagaccaaattaaaggcttggtaccaaga
gacgaggtggaagagacacgttactccttcgatctgcaactagctaaagaggatgctaag
aggattgcaatcaaagaagagcaggtggatccagaatatgaacgcggtggtggtgtaagg
caaagcaacaacgtacccaactga
DBGET
integrated database retrieval system
