Solea senegalensis (Senegalese sole): 122777349
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Entry
122777349 CDS
T07721
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122777349
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122777349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
Atx10homo_assoc
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
122777349
NCBI-ProteinID:
XP_043894455
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Position
LG11:complement(22989349..23008659)
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AA seq
722 aa
AA seq
DB search
MMAPEPLRSATTVGCVEDTSLALPSDDNLRSGQQRVLDQVLTIKRSKSKHGKNGAQSPSP
TGQIPFPLGSYSEFGAFRFSPTKSSSTFSRSHSTAATSYSKTANSQRSRTLSNKSLGGGQ
FSSYAALEQRYKSPRSPQGLRGLAPSRSDPALAPPFSPAPAHVMRVKGQGGHSQHNIQSQ
VSRHSTYSMTNGNHMTSSQTRIVQPTSAQSHTEGKMGTMKISKKELQQSAVNSGINLSDL
TLREAVAFLSHSEESFQQCGATFIQHATYKEERAKQEVHQLGGIPHLVTLLRSSNPAVSQ
AAAGALRNLVFKHHDNKLEVQHCGGIGKALQLLKETDSTETQKQITGLLWNLSSADELKG
ELTATALPALTENVVVPFTCWSDNSANNNIHPDVFYSATGCLRNLSCGQKRERQAMRDCR
GLIDSLMTYVQSCVAEENPDDKSVENCVCILHNLSYQLEAESPKCFSKYYPTDGQLEDKK
SPTIGCFSPKSGKAHKQFAFDVNRRMLDDGVPSGERWLCHPKAMRTYLSLLGSSQKDATL
EASCGALQNLTANWGLGSEAMTQILVQKLGALLHLAPLLKSPNGTLQKTAMSLLGNMSRY
PSVQTTMAKQILPELTGLLSTGPREMGKSDETVAAGCNTVRSLMMADPEVSKKFINNELV
TSLADLSENGSFPRGSKAASLLLYTLWNEKNLQGVLKKLGLAKSLFVNDNTTSVHRSAQI
ID
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggaaccgctgcgttcggccacgaccgtcggctgcgtcgaggacacgtcg
ctcgcgctcccctctgacgacaacctgcgctcgggacaacagcgcgtgctcgatcaggtg
ctcacgatcaagaggagcaagtccaaacatggcaagaacggagcacagagtccgtcaccg
acaggtcagatcccgttccctctgggttcgtacagtgagttcggagccttcaggttttct
ccgaccaaatcaagcagcacctttagccgcagccactccaccgcggcaaccagctacagc
aaaacggcaaacagccagaggagtcgcactctgtccaataaatccctgggaggaggacag
ttcagctcgtacgctgcgttggagcaacgttacaaatcgccccgctcgcctcagggtcta
cgtggactggcacccagccgcagtgacccggctctggctcctcccttttctcctgctcct
gcacacgtcatgagggtcaaaggtcaggggggccacagccagcacaacatccaatctcag
gtcagccgacacagcacctactccatgaccaacggcaatcacatgaccagcagccagacg
cgcatcgtgcagcccacgtccgctcagtcccacaccgaggggaagatgggcaccatgaag
atctccaagaaagagctgcagcagtcggcagtgaacagcgggatcaacctctcagacctg
actctgcgtgaagccgtggcgttcctctctcactctgaggagagcttccagcagtgcggc
gccaccttcatccagcacgccacctacaaggaggagcgtgctaaacaggaggttcaccag
ctgggtgggatccctcacctggtgaccctgctgcgcagctccaatccggcggtgagccag
gcagcggccggcgctctgaggaacctggtgttcaaacaccacgacaacaagctggaggtg
cagcactgcggggggatcgggaaggctctgcagctgctgaaggagaccgactctactgag
acccagaaacagatcacaggcctgctgtggaacctgtcgtcggccgacgagctgaaggga
gagctgacggcgacggcgctgcccgcgctcacggagaacgtggtggtgccgttcacgtgc
tggtcggacaacagcgccaacaacaacattcaccccgatgttttctacagcgccacaggc
tgcctgcggaacttgagctgtggccagaagagagagaggcaggcgatgagagactgtcgc
ggcctcatcgactccctcatgacttacgtgcagtcctgtgtggccgaggaaaacccagat
gataagtctgtggagaactgcgtgtgcatcctccataacctgagctaccagctggaggcg
gagtctccaaagtgcttcagtaagtactacccgacagacggtcagctggaggacaagaaa
agccccaccattggatgtttcagccccaagagtggcaaggctcataagcagtttgcattt
gacgtgaatcgccggatgttagacgacggcgtcccgtcaggtgagcggtggctgtgccat
cccaaagccatgcgcacgtacctgtctctgctgggctcgtctcagaaggacgccacgctg
gaggcgagctgcggcgcgctgcagaacctcactgccaactgggggctgggttccgaggcc
atgacccagatcctggttcagaagttgggtgccctgctgcacttggctcctctgttaaag
tcaccaaacggcactctgcagaaaaccgccatgtccctgctcggtaacatgagccggtat
cccagtgtgcagaccaccatggcaaaacagattctgcccgagctcacgggcctgctgtcg
acggggcctcgcgagatggggaaaagtgacgagactgtggcagcgggctgtaacacggtg
cggtctctgatgatggccgaccccgaggtcagcaagaagttcatcaacaacgaactggtg
acttcgctagccgacctcagcgagaacgggtctttccccagaggcagcaaagccgcctca
ctgctgctctacaccttatggaacgagaagaatttacaaggcgttctgaaaaagctggga
ttggctaagtccctgtttgtcaacgacaacaccacgtcagtgcacaggtcggcacagatc
atcgactga
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