Solea senegalensis (Senegalese sole): 122778422
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Entry
122778422 CDS
T07721
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04010
MAPK signaling pathway
ssen04020
Calcium signaling pathway
ssen04510
Focal adhesion
ssen04540
Gap junction
ssen04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122778422 (pdgfrb)
04020 Calcium signaling pathway
122778422 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122778422 (pdgfrb)
04540 Gap junction
122778422 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122778422 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssen01001
]
122778422 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssen04090
]
122778422 (pdgfrb)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122778422 (pdgfrb)
Protein kinases [BR:
ssen01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
122778422 (pdgfrb)
CD molecules [BR:
ssen04090
]
Proteins
122778422 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
VEGFR-1-like_Ig-like
RIFIN
PPC
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
122778422
NCBI-ProteinID:
XP_043896248
LinkDB
All DBs
Position
LG12:complement(11449778..11474536)
Genome browser
AA seq
1099 aa
AA seq
DB search
MGRVTVFMLHLTVTALLYLCTETCCLEIVPDAKQLVLVEGSSLTLTCSGLSETTWEFKKD
GVPYFQVEHGQNAGQSYQIEQIGTTSSVLTLLNVSWKHTGVYLCVDQYTGETKEVSVFVP
DPDVWFIESVHGMVAKTSEESTIPCVVTNPNINVTLYNRDSNLPITGHYVPSEGYKAQLE
DWTYVCRGELNGEVKQSQAFYVFSIVSEALDAYINASKTILKQGEPLTVNCTVHGVELVF
FSWDIPNRELEVEALTDVLSPMNMRSYLFFPRATMAHSGNYVCHVHEGVQDQSANASVNI
TVLEQGFVNVKPAQLQNISASLQENVELRVEIEAYPPPQVYWGKDGAIIKGDKTIIMRQE
HEIRYVTILTLVRVRTEQKGHYTVLVTNGDDTKEVTFDLEVQVPSQIKDLTDHHLPGNRH
LVTCVAEGVPTPTIQWYSCDSMLKCNNQTAMWRSLIPQPEELSIQTNVSQSDTRKTSRVR
SQVTFHKPQQVTVRCQTSNQAGLVDRRDIKLVSSTLFSQVAVLAAVLALVVIIIMSFIIL
IAMWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFG
RVVEATAYGLTHAQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACT
KHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYHAEKNQDEGCVISRGSTPISQRKGYISSG
SESDGGYMDMSKDEPSVYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLDLVIS
DSSILTYDDLLGFSYQVARGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMH
DSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELF
YSALKRGYRMTKPAHAAEEVYDIMRKCWDEKFETRPDFSFLVHTVGNMLTDSYKKRYNQV
SDNFIKSDHPAVTRTKPRLSSPFPVANPSFGSPSPGTVSFPPDPYNQSMSPANFRQEADS
QDVITSYNDYIIPIPDPKPEDVFTDPSESPASSVALEEVESDSMSQDTADTLPEEDRLEE
TSERDALLGSTPEVEDSFL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggggagggtgacagtgttcatgctccatcttacagtaacagctctcctgtatctctgc
accgagacgtgttgcttggagatagtgcctgatgccaaacagctggtcctggttgagggc
tcctccctcaccctcacctgctccggcttaagtgagacaacctgggagttcaagaaggat
ggtgtgccctattttcaagtggaacatggtcaaaatgctggtcaaagctaccaaattgag
cagattggcaccacatccagtgttctgaccttgttgaacgtgagctggaagcacacaggg
gtttatctgtgcgttgatcaatacactggagaaactaaagaggtgtctgtgtttgtccca
gaccctgatgtgtggttcatagagagcgtccatggcatggtcgctaagaccagcgaggaa
agcaccatcccctgcgtggtcactaacccaaacatcaacgtcaccctgtacaatagggac
tctaatttacccatcacaggacattatgttcccagtgaggggtacaaagctcagcttgag
gactggacctatgtgtgtcgaggagaactgaatggggaggtgaaacagtctcaggcgttc
tacgtcttcagtattgtctccgaggccctggacgcctacatcaacgcgtcaaagaccatc
ctgaagcaaggcgaaccgctgacagtaaactgcacggtgcacggagtggagctagtgttt
ttttcgtgggatatccccaacagagagctcgaggtcgaggctttgacagacgtcctgtct
cccatgaacatgcgctcctacctgttcttccctcgtgccacaatggcccacagtggaaac
tacgtctgccatgtccatgagggagtccaagaccagtctgccaatgccagcgtcaacatc
accgtgcttgagcaaggctttgtgaacgtgaagcccgcgcagctacaaaacatttcagcc
agtttgcaagagaacgtggagctgagagttgaaattgaagcctaccctccccctcaggtc
tattggggcaaagatggtgccattatcaagggagataaaaccatcataatgagacaagag
catgagatcagatatgtgactattctcactttagtgagggtgaggacagagcagaagggc
cactacaccgtcctggtcaccaacggagatgacacaaaggaagtgacctttgacttggag
gtccaagttccctctcagattaaagacctgacggaccaccacctcccagggaatagacat
ttggtgacctgcgtagccgagggagtcccaacaccgaccatacagtggtacagctgtgac
agcatgctcaagtgcaacaaccagactgcaatgtggaggtcactgataccacagccggag
gagctgagtatccagaccaatgtgagccaaagtgacactcgtaaaaccagtcgggtccgc
agccaggtgaccttccacaagccacagcaggtgaccgttcgctgtcagaccagcaaccaa
gcggggctcgttgacaggagagacatcaaactggtgtccagcactcttttctcccaggta
gctgtgctggctgctgttctggctctagttgtcatcattattatgtcttttatcatcctc
atcgccatgtggaggaagaaaccgcgctatgaaatcagatggaaggtgatcgagtctgtg
agccaggatggccatgagtacatctatgtggaccccatccacctgccttatgacctggct
tgggaaatgccacgagacagcctggtgcttggtcgcactcttggatcgggagcctttggc
agggtggtcgaggcaacagcgtacggtctcactcatgcacagtccagcacaaaagtggct
gtgaaaatgctgaaatccacagccaggaggagtgagactcaggccctgatgtcagagctg
aagatcatgagtcacctgggtcctcacctcaacattgtgaacttgttaggagcctgcacc
aaacatggccctctgtatctggtgactgagtactgtcgctatggcgacctggtagactac
ttgcacaggaacaagcacaccttcctgcagtaccatgctgagaagaaccaagatgaaggc
tgtgtgatctcaagaggcagcactccgatcagccagaggaaaggctatatctcctctgga
agtgagagtgatggcggatacatggatatgagcaaagacgagccctcagtctacgtgccc
atgcaggagcagatagacaccatcaagtacgcagacatccaaccttctccatacgagtct
ccgtaccagcaagacatttatcaggaacaaggtggcggcagattagaccttgtcatcagt
gactcttccatcctcacctacgatgatcttttgggcttcagctaccaagtggcaagggga
atggagttccttgcctccaagaattgtgtccatcgtgaccttgctgccaggaacgtcttg
atctgtgagggcaaacttgtgaagatctgcgactttggcctggccagagacatcatgcat
gactccaactacatctctaaaggcagtaccttcctgcccctgaagtggatggcaccagaa
agtattttccataatttgtacacaaccctcagcgacgtgtggtcgtacgggatactgctg
tgggagattttcacattgggaggaaccccctaccccgatttacctatgaatgagttattc
tacagcgctttgaagagaggctacagaatgaccaaacccgcccatgccgcagaagaagtt
tatgatatcatgaggaagtgctgggatgagaagtttgagacgaggccagacttctccttt
ctggtgcacactgttgggaatatgctgacagacagctataaaaagagatacaaccaagtc
agtgacaacttcataaagagtgaccacccggcagtcacccgcaccaaacccagactctcc
tcaccttttccagtcgccaatccatcattcggctcaccttccccaggcacagtgtccttc
cccccggacccctacaaccagagcatgagccctgcaaacttcagacaagaggcagactcg
caggacgtgataacttcctacaacgactacatcattcccatcccagaccccaaaccagag
gacgttttcaccgatccatcagaaagccctgcaagctctgtggctctggaggaggtagag
agcgactccatgtcccaggacacagccgacactcttccggaggaggacaggctggaggag
accagcgagagagacgctctgctgggctccacacccgaggtagaggacagcttcctgtag
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