Solea senegalensis (Senegalese sole): 122778589
Help
Entry
122778589 CDS
T07721
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122778589
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Protocadherins
122778589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF7276
Motif
Other DBs
NCBI-GeneID:
122778589
NCBI-ProteinID:
XP_043896568
LinkDB
All DBs
Position
LG12:7828290..7831611
Genome browser
AA seq
884 aa
AA seq
DB search
MEYVNRSGQASNRSGCYFRFSLWEITHPNGSGMTKTMHYRDWRWQAIWWHYFFLLWSTTA
AQTRHSIPEELKQGSVVGNLAKDLGLGLSEIFNRKLRVSSEADEQYFSVDAGKGELVVND
RIDREALCGQSVSCVLPLQIVLETPLTLHRIEVEIKDINDNAPRFHSKETALKISESAAV
GARFRLQSAEDLDVGSNSVKSYTLTKNDCFTLKMKEVEDGKTVPELVLEKPLDREKKAVH
QLLLTALDGGNPVMSGTSQITITVLDVNDNFPVFDQNSYKVSLPENTAKYTFVIKVTATD
ADEGPNGEVNFSFDSRTLDSVTSMFEINSVTGEIYLKGDLDYEKDTSYKIEITAKDKGVP
EMESHCRLQIDVVDVNDNTPEIVLTSEPQPVREDAPSGTVVALLNARDADSGNNSKVTLQ
LPKGSPFTLKPSFSNNYALVTKGVLDRERFSQYNIEITATDSGSPPLSSKKTIPVTVADV
NDNPPVFTQSSYNVYLKENGVPGSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYV
YINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQGSPSLSTNATVHVFILDQNDNAPAVIYP
SSAAMGSLSHQRMPRPAKAGHLVTKVTAVDADSGHNAWISYKLTEATDASLFTVNLYTGE
VRTKRAVSEQDDSSQRLLIEIRDDGEPAQSSTVTVSILLEDGLHEPILDLRQKVAEPSKK
NGRIALYLILSLASVSVLSLLTFLILAVKCIRNSRSSGSCCMRRSDCDDYKNPNRNLQIQ
LNSDGPIKYVEVLGGDMLSQSHSFRSCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLP
DSTWTFESQQVSRHIIELLCNLYHMLLLVTSHKHLRFYILPACV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgtcaatcggagtggccaagcctctaatagaagtggatgttattttcgattt
tctctatgggaaataacacatcctaacggatctgggatgacaaagacaatgcactaccga
gactggagatggcaggcgatttggtggcattatttctttctcctgtggagtacaacagcc
gcacagactcgtcacagcatcccagaggagctaaagcagggttctgtggtaggaaatcta
gcgaaagaccttggtttgggactgtctgagattttcaaccgtaaactgcgtgtatcctct
gaggctgatgagcagtatttcagtgtggatgcggggaagggcgagctggtggtgaatgac
agaatagacagagaggctttgtgtggacaaagcgtcagctgcgtgttgcctctgcagatt
gtccttgaaacccccctaactttacatcgaattgaggtagaaattaaggatataaatgat
aacgcccccagatttcactcaaaggaaacggctttgaaaatttctgaatcggcagccgtg
ggagctcgatttcgattacagagcgcagaagatttagatgttggaagtaattcggtgaaa
tcgtacacgcttaccaaaaacgactgttttacgttgaaaatgaaggaggttgaggatgga
aaaactgttccggagctagtgttagagaagccactggacagagagaagaaagcagttcac
cagcttctgctgacagcattagacggtgggaatccagtcatgtctggaacctcacagatc
acaatcactgtgcttgatgtaaatgataatttcccagtatttgatcaaaattcatataag
gtttccttacctgagaatactgcaaagtatacttttgttattaaggtgacagcaactgac
gctgacgagggaccaaacggtgaagttaatttctcttttgactcccggacgcttgattct
gtcacatcaatgtttgaaatcaattcagtaacgggtgaaatatatttgaaaggagattta
gattatgaaaaagacacatcttacaaaatagaaataactgcaaaagacaaaggtgttcct
gaaatggagagtcactgtcgtctgcagatagatgttgtggatgttaatgataatactcca
gaaattgttctcacctctgaaccacagccagtgcgcgaggacgcaccgagtggcacagtg
gtggctttgctcaacgcacgtgacgcggactcgggtaataacagcaaagtaacactgcag
ctacccaaaggttctccttttacgctaaaaccatcattttctaataattatgcactggta
acaaaaggtgttttggaccgagagcgtttctctcagtataacattgagatcacagccact
gattcaggttctcctcctctgtccagtaagaaaactattccggttactgtcgctgatgtg
aatgacaaccctcctgtattcactcagtcctcctataatgtatatttaaaagagaatgga
gttccaggatctatactgtactcagtatcagcctctgacctggattttggagaaaatgct
aaaatctcttactctatactggactctaaagtgcaggacgtttctgtctcatcgtatgtt
tacattaactcagataacggaagcatctacagcatgcactcgtttgactatgagaaactc
aaggtgtttcagattcaggttcaggcaaaggatcagggctctccgtctctcagcaccaac
gctactgtccatgtttttatcctggaccagaacgacaacgcacccgctgttatttacccc
tcctccgctgccatgggctccctctctcatcagaggatgccccgtcccgccaaagcgggt
cacctggttaccaaggtgacagctgtggacgctgactcgggccataacgcctggatctcc
tacaaactgacggaggccacagacgcgtctctgttcactgtcaacctgtacacaggggag
gtgaggactaaacgcgctgtgtccgagcaggacgactcctctcagaggctgcttatagag
atcagagacgacggggaaccggcccagtcctccaccgtcacggtgtccatcctgctggag
gacggtctccatgagcccatcttagacctgcgacagaaggtagcagagcccagcaagaaa
aatgggagaatcgccctttatctgattctctctctggcctcggtgtccgtgctgtctctg
ttgacttttctcatcttagcggttaaatgcatcaggaacagcagaagcagcggtagttgc
tgcatgagacggagcgactgtgatgattacaagaaccccaacagaaacctgcagattcag
ctcaactctgatggacccataaagtacgtggaggtgctgggaggagacatgttgtctcag
agtcactccttcaggtcctgtatgtctccaatgtcagagtacagtgatttcactttgatt
aagcccagcagcaccactgactttaaggaggtgatcagtgtcctggatgcgtctttacct
gacagcacctggacctttgagagccagcaggtgagcagacatataattgaactgctgtgt
aatctatatcacatgctgctgttggtaacaagtcacaaacacttgcgattttatatttta
cctgcatgtgtatag
DBGET
integrated database retrieval system
