Solea senegalensis (Senegalese sole): 122778590
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Entry
122778590 CDS
T07721
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122778590
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Protocadherins
122778590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
122778590
NCBI-ProteinID:
XP_043896569
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Position
LG12:7832203..7834884
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AA seq
842 aa
AA seq
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MIATVFSITSLGNNSNGPGMTKRIGYKDWRWQALWWHIFFLLWSIIHAQTRYSIPEELKQ
GSVVGNLAKDLGLALSEIFDRKLRVASEADKQYFTVDAGKGELVVNDRIDREALCGPSAS
CVLTLQVVIDKPLQLYRVEVEIQDINDNSPVFPPQDIILEIAESTVAGARFPLKTAQDLD
VGVNSVRSYTLNKDEFFSLKVKDVSGGRKVPELILSKSLDREIKPIHHLQLTAIDGGNPV
KSGSSQITIHVLDINDNFPVFEKNVYKISISENSAQGASIIKLTAKDIDDGSNGEVEYSF
GTHTPDNVLSVFDIDSSTGELRLKGKLDFETNANYEVDICAKDKGTPRMEGHCTVHIEVI
DINDNAPNIFLTSQPNSLPEDAPSGTVVALISARDLDSGDNGKVSLQLPKDFPFNLKPSF
SDNYALVTSGALDRESISEYNIEITASDLGSPPLSTKKTINVSVTDVNDNPPVFTQSSYN
VYLKENGAPGSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMH
SFDYEKLKVFQIQVQAKDQGSPSLSSNTTVHVFILDQNDNAPAVIYPSSAAMGSLSHQRM
PRPAKAGHLVTKVTAVDADSGHNAWISYKLTEATDASLFTVNLYTGEVRTKRAVSEQDDS
SQRLLIEIRDDGEPAQSSTVTVSILLEDGLHEPILDLRQKVAEPSKKNGRIALYLILSLA
SVSVLSLLTFLILAVKCIRNSRSSGSCCMRRSDCDDYKNPNRNLQIQLNSDGPIKYVEVL
GGDMLSQSHSFRSCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSR
KQ
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgattgctaccgtcttttcgatcacctcactgggaaataattctaacggaccggggatg
acaaagagaataggatacaaagactggagatggcaggcgctttggtggcatattttcttc
ctcttgtggagtataattcacgcacagactcgttacagcatcccagaagagctcaagcag
ggctctgtggtaggaaatctagccaaagatcttggtttggcactgtctgagatttttgac
cgtaaactgcgcgtcgcctctgaggctgataagcagtatttcactgtggatgcggggaag
ggcgagctggtggtgaatgacaggatagacagagaggctttatgtggaccaagcgccagc
tgtgtgttgactctgcaggtagttattgataaaccgttacagttgtacagagtcgaggtg
gaaatacaggatattaatgacaattctccagtatttcctccgcaagatattatattagaa
atagcagagtcgacagtagcaggggcacgttttcctttaaagacagcccaggatctcgat
gttggagtgaattcagtcaggtcttataccctgaacaaagacgagttctttagtttaaaa
gttaaagatgtttccggagggagaaaagtcccagagctaatcttgtctaaatctttagac
agagaaataaaacctatacaccacctgcagttaacagctatagatggtggaaatccagtg
aaatctggaagctcacaaattacaatacatgtgcttgatattaatgacaatttccctgta
tttgagaaaaatgtctacaaaatatcgataagcgaaaatagtgcacaaggcgcatcaata
ataaaactgacagcaaaagacatcgatgatggttctaatggagaagtagagtattcattt
ggaactcacacgccagataatgttctctctgtgtttgatattgattcgtcaaccggagaa
ttgcgtctgaaagggaaattagacttcgagacaaacgcaaactatgaggttgacatttgc
gccaaagacaaaggaactccaagaatggagggacactgtactgtccacattgaagtgata
gatattaacgataatgctcctaatatatttctgacctctcaacctaattctttgccagag
gatgcgccaagcggaactgtagtagctttaatcagtgcccgagaccttgattctggtgac
aacggtaaagtgtcattacagctcccaaaggatttccctttcaacctgaaaccatctttt
tctgacaattacgctctggttaccagcggtgctttagaccgagagagcatctcagagtac
aatattgagattacagcctctgatctaggctctccccctctgtccacgaagaaaactata
aacgtttctgttactgatgtgaatgacaaccctcctgtattcactcagtcctcctataat
gtatatttaaaagagaatggagctccaggatctatactgtactcagtatcagcctctgac
ctggattttggagaaaatgctaaaatctcttactctatactggactctaaagtgcaggac
gtttctgtctcatcgtatgtttacattaactcagataacggaagcatctacagcatgcac
tcgtttgactatgagaaactcaaggtgtttcagattcaggttcaggcaaaggatcagggc
tctccgtctctcagcagcaacactactgtccatgtttttatcctggaccagaacgacaac
gcacccgctgttatttacccctcctccgctgccatgggctccctctctcatcagaggatg
ccccgtcccgctaaagcgggtcacctggttaccaaggtgacagctgtggacgctgactcg
ggccataacgcctggatctcctacaaactgacggaggccacagacgcgtctctgttcact
gtcaacctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagatcagagacgacggggaaccggcccagtcctccaccgtc
acggtgtccatcctgctggaggacggtctccatgagcccatcttagacctgcgacagaag
gtagcagagcccagcaagaaaaacgggagaatcgccctttatctgattctctctctggcc
tcggtgtccgtgctgtctctgttgacttttctcatcttagcggttaaatgcatcaggaac
agcagaagcagcggtagttgctgcatgagacggagcgactgtgatgattacaagaacccc
aatagaaacctgcagattcagctcaactctgatggacccataaagtacgtggaggtgctg
ggaggagacatgttgtctcagagtcactccttcaggtcctgtatgtctcctatgtcagag
tacagtgatttcactttgattaagcccagcagcaccactgactttaaggaggtgatcagt
gtcctggatgcgtctttacctgacagcacctggacctttgagagccagcaggtgagcaga
aaacagtag
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