Solea senegalensis (Senegalese sole): 122779444
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Entry
122779444 CDS
T07721
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04110
Cell cycle
ssen04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122779444 (rb1)
04218 Cellular senescence
122779444 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122779444 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122779444 (rb1)
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122779444 (rb1)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
122779444 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
HTH_CHD6-9
Motif
Other DBs
NCBI-GeneID:
122779444
NCBI-ProteinID:
XP_043897736
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All DBs
Position
LG13:1462979..1483120
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AA seq
914 aa
AA seq
DB search
MPPKKRNSVAAQNKALKPGAERASPDKKESPDLSAKKHRDKDAEFVTLCKSLQVTDVVCD
RAWSLWKTVQESMDGVSDSQKRLWGACLFVTVTDLDVPCFTLSQVLKAVSLNLKQFMALV
RKLDVNLDTINTKVDSVMTRLEKKYDVTLALYQRFEKTCKRIFALVADDKEREIMRSCWT
MFLLAKGRVLQMEDDLVISFQLLLCTLELFIKRCPPDLLQPLYKSAIGKVQSQPTRTSRR
NQSKAKSRPPEPEVEVQLLETLCKENECNAEEVKNVYQTSFSAFLDSLDLSRSSDFPPAS
DIDQQYEEHYLKSRDIDGRLFFDGDETVLLPKVEVSQVERTPKKHPPDDDAVLIPPQTPI
RAAMTSIQQLRGDLISSGDQPSTTLNTYFKNCTVDPTQNMLTRLETLEQLFSQRFGQAVG
PRCLILGKQRFALGVRLYYKIMEAMLKSEEKRLSVQNFSKLLNDATFHTSLLACALEVVM
ATYGESSFKTGGYNHAAGDSAETDVCFPWILHVFNLAAFDFYKVIESFIKADPTLSKDTV
KHLETCENLIMERIAWRTDSPLFELLKQEHEGGAVEQVETPASFSQPLQHNHTAADLYLS
PVRPGHRVLPPESPAPANSQASTQAPNQPANQTPRQPKSNSLSLFYKKLYRLAYTRLEKL
CTYLLSSHPELEPIIWTLFQHTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKTIV
TEYKNMPNTNQETFKHVLITEAHYDSIIVFYNQVFMQRLKTNILQYASPRPPTLSPIPQI
PRSPYKFPNSPLRVPGSNNVYISPLKNPRMSPGIMTPRSRMLVSIGESFGRSSRFREINQ
MVNSSERSFKRTLDLSSAPKPLKRLRFDVDGQDEADGSKSGRDSTLIQKLAEMSSTRSRM
QEQKLKEDAEARKE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaaaagcgcaactctgtggcggcacagaacaaggctttgaagcccggtgca
gagagagcctctccggacaagaaggagagtccagacttatctgctaaaaaacacagagac
aaggatgcagagtttgtgaccctttgcaagagcctgcaggtcacagatgtggtgtgtgac
cgtgcctggtccctgtggaaaactgttcaagagtccatggatggagtctctgacagtcag
aaaaggctgtggggtgcttgtctgttcgtgacagtgacagacctggatgttccctgtttc
actctaagtcaggttctgaaagcagtctctctaaatttaaagcagttcatggctctggtc
aggaagctggacgtgaacttggatacaataaacaccaaggtggattcagtgatgacacga
cttgagaagaagtatgacgtgacgctggctctctaccagaggtttgagaagacatgcaag
aggatctttgctttggttgcagatgacaaggagagggagatcatgaggagttgctggacg
atgtttcttttggccaaaggaagggtgttgcagatggaggatgacctggtcatatcattc
caactgcttctgtgtacactggagttattcatcaagcgctgccctccagaccttctgcag
cctctttacaaatcggcaatcggtaaagttcagagtcagccaactcgaacatctcgtcgc
aaccagagcaaagccaaatcccgacctcctgagccggaggtggaggtgcagcttcttgaa
accttgtgcaaagagaatgaatgcaatgcagaagaggtgaagaacgtgtaccagaccagt
ttctcagccttcctggattcattggatctttcaagatcttcagattttcctccggcaagt
gacattgaccaacaatatgaagaacactacctcaagagcagagacatcgatggacggctg
ttttttgatggagacgagactgttcttctgcctaaagtcgaagtatcacaggtggagaga
acgccaaagaagcatccaccagatgacgacgccgtactcatccctccacagactccaatc
agagctgcgatgacctccattcagcagttgaggggtgatctcatctcctctggggatcag
ccgtccaccaccctgaatacatatttcaaaaattgcaccgtggacccgacgcagaacatg
ctgacgcgcttggagacactggaacagttgttcagtcaaagatttggccaagcagtcggc
ccacgctgtttaatacttgggaagcagagatttgccctgggagtgagactgtattataaa
atcatggaggcgatgctgaaatcggaagaaaagcgtctgtctgtgcaaaatttcagtaaa
ctcctcaacgacgccacgttccacacatcactcttggcctgtgctttggaggtcgtcatg
gcaacatacggagagagcagttttaagactggaggatacaaccacgccgctggggactcg
gctgagacggacgtgtgtttcccctggatactgcatgtgttcaaccttgccgcctttgac
ttctacaaagtcatcgagagcttcatcaaggccgaccccacgctgagcaaagacactgtc
aaacatctggagacctgtgaaaacctcatcatggagaggattgcgtggaggacggactcc
ccgctgttcgagctgttgaaacaggagcatgaaggcggcgctgtggagcaggtggagacc
ccggccagtttcagtcaaccactgcagcacaaccacacagcagctgacctatacctgtct
cctgtgcgtccgggtcatcgcgtcttgcctcctgagtctccagccccagccaactctcaa
gcgtccactcaggctccaaaccagccggccaatcagactcctcgacagccaaagtccaac
tctctcagcctcttctataagaagttgtaccgcctggcctacacaaggctggagaaactc
tgcacctacctgctgtcctctcaccctgaactggagcccattatatggacacttttccag
cacacactgcagcatgaatacgagctaatgagagaccgtcaccttgaccagttgatgatg
tccgccatgtacgccatatgcaaagtgaagagtgtcgaccttcgcttcaagaccatcgtc
actgaatacaagaatatgcccaacaccaaccaggagacctttaagcacgtgttgatcact
gaggcccactacgactccatcattgtcttctacaaccaagtcttcatgcagaggctgaaa
accaacatcctgcagtatgcatctcccaggccaccgaccctctctccaatcccacaaatc
ccacgcagcccctacaaattcccaaattctcccctgcgtgtgcctggcagcaacaacgtg
tacatctcacctctgaaaaacccccgcatgtccccgggtatcatgacccctcgctccaga
atgctggtgtcgataggtgaatcttttgggcggtctagtcgattccgggagatcaaccag
atggtgaatagcagtgagcgctcctttaagcggactctggatctcagctctgctccaaag
cctctgaagaggttacgattcgacgtggatggacaggacgaagcggacggaagtaaatct
ggtagagattctactctgatacagaagcttgcagagatgagctccactcgaagtcgcatg
caggagcagaagctgaaggaggacgcggaggcgaggaaggagtga
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