Solea senegalensis (Senegalese sole): 122781757 Help Entry 122781757         CDS       T07721                                  Symbol slit1a Name (RefSeq) slit homolog 1a isoform X1   KO K06838   slit 1 Organism ssen  Solea senegalensis (Senegalese sole) Brite KEGG Orthology (KO) [BR:ssen00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssen00536]     122781757 (slit1a) Glycosaminoglycan binding proteins [BR:ssen00536]  Heparan sulfate / Heparin   Axon guidance molecules    122781757 (slit1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 hEGF LRR_1 LRRNT LRR_9 LRRCT EGF_TEN LRR_14 LRR_EndoS EGF_Teneurin EGF_DL_JAG LRR_NXF1-5 EGF_3 Motif Other DBs NCBI-GeneID:  122781757 NCBI-ProteinID:  XP_043901678 LinkDB All DBs Position LG15:complement(6237704..6329901) Genome browser AA seq 1537 aa AA seqDB search MCTLAGQQPWMWAVMLCALLIGSASACPALCSCSGTTVDCHGLGLKTMPRNIPRNTERLE LNGNNLTRVTKSDFAGLKYLRVLQLMENQITVIERGAFDDMKELERLRLNRNQLQQLPEL LFQKNPALSRLDLSENFIQSIPRKAFRGATDIKNLQLDKNHISCIEDGAFRALRGLEVLT LNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQWLRQRPTLGLFTQCTGPTE LRGLNVAEVQKHEFSCSGHQESSSLQPCSTGGGSCPAMCTCSNNIVDCRGKGLTAIPANL PDSMAEIRLEQNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGN KITDLPKGVFDGLYALQLLLLNANKIHCIRANTFQDLQNLSLLSLYDNKIQTLAKGTFTS LRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKRIGQIKSKKFRC SAKEQYVIPGTEDTHLNNACNSDPVCPPKCRCESNVVDCSNLKLTKIPEHIPSSTSELRL NNNDITSMEATGVFKNLSQLKKINLSNNKITEIEDGSFEGASSVVELHLTANQIDTVRSG MFRGLEGLRMLMLRNNKLSCVHNDSFTGLHNVRLLSLYDNQLTTITPGAFDTLQTLSTLN LLANSFNCDCRLAWLGDWLRSRKIVTGNPRCQRPAFLKEIPLQDVALPDFRCEEGQEESS CVPRPQCPSECTCLETVVRCSNKHLHTLPKGIPRNVTELYLDGNQFSVVPKELSAFKYLQ LVDLSNNKINSLTNSSFANMSQLTTLILSYNSLRCIPKMAFSGLHSLRLLSLHGNEVSEL PEGIFNDVASLSHLAIGANPLHCDCNLRWLSDWVKTGYKEPGIARCASPKSMEGKLLLTT PAKKFECTGDVDTAVLAKCNPCLSGPCLNQGICHSDLVEIYRCSCPPGFKGKNCETALNA CVSSPCSNGGTCQVDEDEEGEYSCFCPLGFEGPTCQTDIDDCEDNDCENGATCIDGVNNY TCLCPPYYTGEMCEEMEDVCAPGRSPCQHQSTCLITSTGPKCVCAPGYVGDDCSVDYNDC EEHRCQNGALCVDELNGYSCVCPEGYSGQLCEVPPSLLSLCELADCQNSAPCVERGGRAL CQCPPEFGGPRCEKLVSVNFIDRDSYLLLSDLKNWPQANITLQVSTAEDNGILLYNGDND HIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVNLSIDGGLPTTM DSFGAVRPLNREAPLYVGGRGPLQNTPPSSAGMPVDIHSSAFRLWQIQNGSSFHGCIQNL YINNELQDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGVQGPVCHCQPGWSGPHCDQPA SNPCQGSKCVHGKCIPLDSQSYRCECEEGYRGALCNQQGELFNPCRRLNCKHGRCQISDT GDAYCHCESGYTGDLCDAESECRGEPVRDFYQVQRGYAICQTTRVVSWVECTGVCDTGAC CASQRMKRRKYTFECSDGTSFTEEVEKTIKCGCVGCM NT seq 4614 nt NT seq  +upstreamnt  +downstreamnt atgtgtacgctggccggacaacaaccctggatgtgggcagtgatgctctgtgccttgctc ataggcagtgccagtgcctgtcctgccctgtgctcctgcagcggcaccacagtggactgc cacggactgggtctcaaaaccatgccaaggaatatcccccgcaacactgaaagactggag ctgaatgggaataacctcacacgcgtcaccaagagtgactttgctggactcaagtacttg cgagttctgcaactgatggagaatcagattaccgtgattgagcgcggggcttttgatgac atgaaggagctggagagactgcggctgaaccgtaatcaactgcagcagcttcctgagttg ctgtttcagaagaaccctgccctgtctcgactagatctgagtgagaacttcatccagtcc atccccagaaaagccttcagaggagctacagacatcaaaaaccttcagctggataaaaac cacatcagctgcatcgaggatggagctttcagagctttgaggggcctggaagtgctaacg ctgaacaacaacaatatcagcagcatcccggtctccagcttcaaccacatgcccaaacta cgaaccttccgactgcactccaacaacctgaactgcgactgtcatctggcctggttggcc cagtggctcagacagagaccgacacttggccttttcacccagtgcactggccccactgag ctcagaggacttaatgtggcagaggtgcagaaacatgaattcagctgctcaggtcaccag gagtcttccagcctgcagccatgcagcacaggcggtggctcatgccccgccatgtgcacc tgcagtaacaacatcgtggactgtcgagggaagggtctgaccgccatcccagccaacctg cctgacagcatggctgagatacgtctggagcagaatggtattaagtctattccacccgga gccttctctccctacaagaagctgcgtaggattgacctgagcaacaaccagatttcggag atcgctcctgatgccttccagggccttcgttcgctcaactctcttgtgctgtatggaaat aagatcactgacctgcccaagggggtgttcgatggcctgtacgccctgcaactgctgttg ctcaatgccaacaagattcattgcatacgcgccaacactttccaggacctgcagaatctc tccctgctgtcgctctatgacaacaagatccaaactctcgccaagggcaccttcacttca ctgcgagctatacagacccttcacctggcccagaacccattcatttgtgactgtaatctg aaatggctggcagactacctgcgctccaaccccattgagaccagcggtgcccgctgtgcc agcccacgcagacttgcaaacaaacgtatcggacagatcaagagcaagaagttccgctgc tctgccaaagagcagtacgtcatcccaggcacagaggacacccatctgaataatgcatgt aacagtgacccagtgtgtcctcccaagtgccgctgcgagtcgaacgtcgtggactgttcc aacctgaagctcaccaagattcccgagcacatcccatcgtccacctctgaactccgcctg aacaacaacgatatcaccagtatggaggcgactggagtttttaagaacctttcccagctg aagaaaataaacctaagcaacaacaaaatcacagagattgaggacggatcgtttgaaggc gcctcgtctgtcgttgagcttcatctcacggctaatcagatcgatacggtgcgaagtggg atgttccgaggccttgagggactacggatgctgatgctcaggaacaacaagctcagctgt gtccacaacgacagtttcacagggctgcacaacgtccgcctgctgtcactgtacgacaac cagctgaccaccatcactcctggagccttcgacactctgcagaccctctctacccttaat ctcttggccaactcattcaactgtgactgccggctggcttggctcggagattggctgagg agtaggaagattgtgacaggtaaccctcgctgccagcgccctgccttcctgaaggagatc cctctgcaggatgtggctctaccggacttccgctgtgaggagggccaagaggagtcaagc tgtgtgcccagaccccagtgtcccagtgaatgcacttgcctggagacggtggtgcgctgt agtaacaagcacctccacacactgcccaaaggcatccccaggaatgtgactgaactgtat ctggatggaaaccagttcagtgttgtgccaaaggaactgtctgccttcaaatacctacag ctggtagacctgagcaacaacaagatcaactctctgaccaactcgtccttcgccaacatg agccagctcaccactctaattctcagctacaactccctgcgctgtatacccaaaatggcc ttcagtggactgcattccctacgactgctgtctctccatggcaacgaggtctcagagctt cccgaaggcatcttcaacgatgtcgcttccctctcccacttggcgatcggtgccaacccg ttgcactgtgactgcaacctgcgctggttgtccgactgggtgaagacaggatacaaagag cctggtatcgctcgctgtgccagccccaagagcatggagggcaaactgctgctcaccaca cctgcaaagaagtttgagtgcacaggagacgttgacactgcagtgctggccaagtgcaac ccctgtctgtctggtccctgtctaaaccagggcatctgccacagcgacctggtggagatc tacaggtgcagctgtcctcccgggttcaagggcaagaactgtgagacagccctgaatgcc tgtgtgagtagcccatgttccaatggaggaacctgtcaagtggatgaggatgaggaggga gaatacagttgcttttgtccgctgggcttcgagggccccacctgccagactgacatcgac gactgtgaagacaacgactgtgagaacggagccacttgcatcgatggagtcaacaactac acttgtctttgtcccccatattacaccggagagatgtgtgaggaaatggaggatgtgtgt gccccaggacgaagcccctgccagcatcagtccacctgcctcatcacctccactggacct aagtgtgtgtgcgctcctggttatgtcggtgatgactgcagtgtagactataatgactgt gaggagcatcgctgtcagaatggagcgctgtgtgtggacgaattgaacggatactcctgc gtctgtcctgagggatacagcggtcagctgtgtgaggtccccccctcgctgctctccctg tgtgagctggctgactgtcagaacagcgctccgtgtgtggagcgaggtggacgggctctc tgccagtgtcctccagagttcggtgggccgcgctgcgagaagctggtcagtgtcaacttc atcgacagagattcataccttctgctctctgacctcaagaactggcctcaagctaacatc accctccaggtgtcaacagctgaagataatggaattttactgtacaacggcgacaatgat catattgcagtggagctttaccaaggtcacgtcaaggtcagctatgacccgggcagccag ccgggacatgccatctacagtactgagacgatcaatgatggccagttccacacagtggag ctcgtgacctttgatcagatggtgaacctgtccatcgacgggggtctccctaccacaatg gacagcttcggggcagtgcggcccctcaacagggaggctccactatacgtggggggtagg ggccctctccagaacacacctccctcctctgcaggaatgccagtggatatacactcgagt gctttccgtctctggcagatccagaatggctccagtttccacggctgcatccagaacctg tacatcaacaacgagctccaggacttcaccaagacccagatgaagcctggcgtggttcca ggctgcgagccctgcaagaagatctactgtgtccatggcatctgtcagcctgatggggtc cagggaccagtgtgccactgccagccaggctggagcggaccacactgtgaccaacctgcc agcaacccctgccagggcagcaagtgcgtccatggaaagtgcatccccctggactctcag tcttaccgctgtgagtgtgaggagggttaccgtggagccctgtgtaaccaacagggagag cttttcaacccctgccgtcgcctcaactgcaaacacggtcgctgccagatctcagacaca ggagacgcctactgtcactgtgaaagtggctacactggcgatctctgtgatgccgagtct gagtgccgaggggagcctgtgcgagacttctaccaggtacagcgaggctacgccatctgc cagacgacacgcgtggtctcgtgggtggagtgcaccggcgtctgtgacacgggcgcctgc tgtgccagccagagaatgaagcgccggaaatacaccttcgagtgcagcgatggaacctcc ttcaccgaggaggtggaaaagaccatcaagtgcggctgcgtgggctgcatgtag

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