Solea senegalensis (Senegalese sole): 122782667
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Entry
122782667 CDS
T07721
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122782667
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122782667
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
122782667
NCBI-ProteinID:
XP_043903038
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Position
LG16:5841089..5864208
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AA seq
1790 aa
AA seq
DB search
MKRSKHRGHKEDKNGDEPAILETEHMGMFMGGGQDLDTISVASVTAVTTNVSNKRSKPDI
KMEPSSGRPVDYQVSVTVIEARQLVGQNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYFV
FDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYSQPEHQFYHKWALLSDP
DDITGGCKGYVKCDVAVVAKGDTIKTPHKANESDEDDIEGNLLIPEGVPAERQWARYYLK
IYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQI
VFTEMFPPLCKRMKIQIRDSDKVNDVAMGTHFLDLKKISNDGDKGFLPTLGPAWVNMYGS
TRTYSLMDEYQELNDGLGEGVSFRARLLVSLGVEILDPSSPDCSSSTEVQVEGVPNISET
ATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEVDGVVQPKRKGKKGEGDEE
ETELIHNSSDEEMEDDGDLTSVATTPLMKPVVTDRNYFHLPYFERKPCFYIKSWWQDQRR
RLFNANIIDNTADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSHGCSQYLSLANKDQN
QSGRTKLDRERLKLCMSEVESIGQQAKAMRTQVKKSTVRDKLKLAQNFLSKLRFLADEPQ
HSVPDVFIWMISNGKRIAYARVPSKDILYSSTDEERGKDCGKVKTMFLRIPGKKGFGPAG
WTVQSKIEIYFWLGLTRQRKDYLNGLPNGFEENKLSKGPGLPCTPPISLTYMMKQIFQLR
VHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLPETLCPTWDQLLVFENVELFGEAN
ELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGNC
AAGEMLAAFELLQIGPNGKADLPPIDGPTDMERGPIMPVPLGIRPVLSKYRIEVLFWGLR
DLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPPLN
IRVVDCRAFGRYTLVGSNAVTSLRKFIYRPSDKQANNWSSNNTEEIIVVNMEPEPSYKKM
DTVVKLDCGSDAVVKVEDDDKDGKGKKKKRKKGDEPEEEEFDESMFDWWSKYFASIETLT
EALKAQEAALSDSEDKDDMDITDSGDIKPDDSPVKGSKRGRGKKDKKKMTIDPFERKKPK
LDELKVYPKELEGEFDNFEDWLHSFNLFRGKGGDDDDQNVTDEDRIVGRFKGSLCMYKVA
DDLPRDFDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIRLGKTEIK
DKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRFYSK
HRATCGISRNYAIHGYNVWRDPMKPTHILAKLCKDGKVEAPQYGPGGRVKVENRVFMAPT
EIEDENGLKKQTDEHLALTVLKHWEDIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIEMW
VDMFPKDMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLK
GQQEDKQDTDVHYHSITGEGNFNWRFVFPFDYLMAEEKIVISKKESMFAWDETEYKIPAR
LNLQVWDADHFSADDFLGAIELDLNRFPRGAKTPKQCTIDMVTNEGDMPMVSIFKQKRIK
GWWPFVARNEDEEFELTGKVEAELHLLTGEEAEKNPVGEGRNEPEPLEKPNRPDTSLLWF
LTPLKAIKHLLCTQYKWLTIKIVTALLLLALLALFLYNMPGYMVKKMLGA
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgcggacacaaggaggacaaaaatggagatgagccggccatt
ttggagacagaacacatgggcatgtttatgggaggaggccaagacctggacaccatctca
gtggcctcagtcaccgccgtcaccaccaatgtatcaaataagaggtcaaagccagacatc
aagatggagcccagttcaggaagaccagtcgattaccaagtcagtgtgacagtgattgag
gccagacagctggtgggacagaacatggatccgatggtctgcgtagagattggagaagat
aaaaagtacacctcgatgaaagaatcgaccaactgcccgtattacaatgaatattttgtg
ttcgacttccacgtccctccagatgttatgtttgacaaaatcctgaagttgtctgtaatc
cactctaaaaacctcctgcgtagtggaacactggttggaacctttaaactggatgttggc
acaatctactcacagccagaacatcagttttaccacaaatgggcgctgttgtctgaccct
gacgacatcacaggaggttgtaaaggatatgtgaagtgtgatgttgcagttgtggccaaa
ggagacacaataaagactccacacaaggccaatgagtctgatgaagatgacatagagggg
aatctcttaatacctgaaggggtgccggcagagcgacagtgggctcgctattacctgaag
atctacagagcggagggactcccaagaatgaacaccagcatcatggccaatgtgaaaaag
gccttcataggagaaaataaggacctggttgatccttatgttcaagtgctgtttgctggg
cagaaggggaaaacatcggttcagaagagctgctacgagcccatctggaatgagcaaata
gttttcaccgagatgtttcctccgctgtgcaaacgcatgaagatccagatccgtgactcg
gataaagtgaatgacgttgcaatgggaacacacttccttgacctaaagaagatttccaat
gatggggacaaaggcttccttccaactctgggccctgcctgggtgaacatgtacggctcc
actcggacctactccctcatggacgagtaccaggagttgaatgacggactcggcgagggc
gtgtccttcagagctcgtctgctcgtcagcctgggtgttgagatcctggacccctcctct
cccgactgttccagctccaccgaggtgcaggtggagggagtgcccaacatctcagagacc
gcaaccgggaaagttgaggaatttttcctcttcggttcgttcctcgaggctacaatgatt
gatcggaagatcggtgataaacccatcaactttgaggtcaccataggttactatggaaac
gaagttgatggagtggtccagccaaagaggaaagggaagaagggcgagggcgatgaggag
gaaacagaactgatacacaactcgagtgacgaggagatggaggacgacggggacctgaca
tcagtggctactacacctcttatgaaacctgtcgtcactgatcgaaactacttccacttg
ccctattttgagaggaagccttgtttctacatcaagagctggtggcaggatcagagacgg
aggctgttcaatgccaacatcatagacaacaccgcagataaactggaggatggactaaat
gacgtgcaggaaatcattaagacagagaaggcctatcctgagcgcagactcagaggcgtc
ctggaggaactcagccatggatgcagtcagtatctttcgctggcaaacaaggaccagaat
cagtccggtagaaccaaacttgacagggagagactgaagctgtgcatgtcagaagtggaa
tccatcggccagcaagcgaaggccatgaggacccaagtgaagaaaagtacagttagagat
aaactcaaactggcccagaacttcctgtcaaagctgcgcttcctggctgatgaacctcaa
cacagcgttccggatgttttcatatggatgataagtaacgggaagcgcattgcttatgca
cgtgtcccctccaaagacattctatattctagtacagacgaggagaggggaaaggactgt
ggcaaagtcaaaactatgttcctcaggattcctggaaagaaaggctttgggcccgcgggc
tggacagtccagtccaagatagagatttacttttggctcggtctaaccaggcagcgcaaa
gactacctgaatggccttccaaatggatttgaggaaaacaagttgtccaaaggacccggc
ctgccatgcacgcctcccattagcctcacttacatgatgaaacaaatcttccagctgagg
gtccacatgtaccaagcccgcagcctgtttgctgctgacagcactggcctgtctgatcca
tttgccagagttttcttctcaacacagagtcaagtcactgaggtgttgcctgagaccctc
tgccccacatgggaccagctgctggtctttgagaatgtggagttgtttggcgaggccaac
gaactgagagacgaccctccaatcattgtcattgagatctatgatcaggacacagtgggc
aaagccgacttcatgggcagaacctttgctaagcctgtggtcaagatggcagacgaacac
tacggccccccacgcttccctccacagctggagtactatcagatctaccgcgggaactgt
gccgctggagaaatgctggcagcgtttgaactgctgcagattggacccaatgggaaagcc
gacctgcctccgatagacgggcctacagatatggaacgtggtccaatcatgccagtgcca
ctgggaatccgaccggtgctcagcaagtacaggattgaggttttgttctggggcttgaga
gacttgaagagagtgaatctggcccaggtggatcggcctcgtgtggacatcgaatgtgct
gggaagggggttcagtcagccctcatccccaactacaagaaaaaccccaacttcagcacc
ctcgtcaagtggtttgaagtggatttgcccgagaatgagttgcttcacccgccgctgaac
atccgcgtggtggactgcagggcttttggccgctacactctggtcggctccaacgccgtc
acaagcctccggaagttcatctacaggccgtcagacaagcaggccaacaactggtcctca
aacaatactgaggaaattattgttgtgaatatggaacctgagccttcttataagaagatg
gacactgtggtcaaactagactgtggctctgatgctgtggtcaaagttgaggacgacgat
aaggacgggaaggggaaaaagaagaagaggaagaagggcgatgagcctgaggaggaggaa
ttcgatgagagcatgtttgactggtggtccaaatactttgcctccattgaaactttgaca
gaggcactcaaagctcaagaagcagctctgtcagactccgaggacaaagatgacatggac
atcacagacagtggagacatcaaacctgatgactctcctgtgaaaggctccaagcgagga
agaggaaagaaggacaagaagaagatgacaatcgacccgtttgagaggaaaaagccaaag
ctggacgagctgaaggtttatcctaaggagctagagggcgaattcgacaactttgaggac
tggcttcacagtttcaacctgttcaggggaaagggaggcgatgacgacgaccagaacgtg
acggacgaagaccggattgttggaagattcaaaggctcactgtgcatgtacaaagtggca
gatgatcttcccagagactttgactccaacatgggaatgtttcagaacattcctcacaat
gatcccatcaatatccttgtccgcatctatgtcatcagggcgactgatctgcacccggct
gatattaacggaaaagccgacccgtacatcgcaatcagactgggaaagacagagatcaag
gataaagagaactatatctcaaaacagctgaaccctttgtttggaaagtcttttgacgtt
gaggccacattcccaatggattccacgctcaccgtgtcaatctacgactgggacctggtg
ggaaccgacgatctgatcggagaaaccaaactggaccttgagaatcgcttctacagcaaa
cacagagccacgtgtggtatctcacgtaactacgccatccatggttacaatgtttggaga
gacccaatgaaacccacacacatcctggcgaagctgtgtaaggacggcaaagtggaggcg
ccccagtacggcccaggtggaagagtgaaggtggagaaccgcgtcttcatggctccgact
gagatcgaggacgaaaatggtttgaagaagcagacggatgaacacttggctttgaccgtg
ttgaagcactgggaggacatcccgcgggtcggatgcaaactggtaccagaacacgtggaa
acgcgaccactgctgcacccggacaaacctgggattgaacaaggaagaattgagatgtgg
gtggacatgttccccaaagacatgactgcccctggtcccgcactcgatatttcaccaagg
aaaccaaagaagtttgaactgagggtgatcatctggaacacggatgaagtcgtgctggag
gacgacgacatctttaccggcgagaaatcgagtgatatctttgtgcgaggttggttgaaa
gggcagcaggaggacaagcaggacactgacgtccactaccactccatcaccggggagggc
aacttcaactggcgcttcgtcttccccttcgactacctcatggctgaggagaagatcgtc
atctccaaaaaggagtccatgttcgcctgggacgagacggaatacaagatcccggctcgt
ctgaatctgcaagtgtgggacgccgaccatttctctgcagacgacttcttgggtgctatt
gagctggacctgaaccgcttcccgcgtggcgcgaagactccgaagcagtgcaccattgac
atggtgacgaacgaaggagacatgcccatggtctccatcttcaaacagaagcggatcaaa
ggctggtggccattcgtggccagaaatgaagatgaagagtttgaactgacaggcaaagtg
gaagcagagctgcaccttctgaccggagaggaagctgagaaaaaccctgtcggcgaagga
cgcaacgaaccggagccgctggagaaacccaaccgccccgacaccagccttctgtggttc
ctcacgcccctcaaagccattaaacacttgctctgcacccagtacaagtggctgaccatc
aagatcgtgaccgcgctcctgctgctggccttgctggctcttttcctctacaacatgcct
ggttacatggtcaagaaaatgctgggagcttga
DBGET
integrated database retrieval system
