Solea senegalensis (Senegalese sole): 122784250
Help
Entry
122784250 CDS
T07721
Name
(RefSeq) dermatan-sulfate epimerase-like isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122784250
Enzymes [BR:
ssen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
122784250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
122784250
NCBI-ProteinID:
XP_043905347
LinkDB
All DBs
Position
LG17:complement(1071026..1093778)
Genome browser
AA seq
961 aa
AA seq
DB search
MRTYTRGAPTVFFISLLWLLLVPAEVEAVAATEGDPSGEIPFMGGNYDGHPMLYFSRGDV
EELQYAATGTHRDMARRIREAGETMLEHPEEYLPPWSPADFSARWNEVYGNNLGVLSMFC
LLYPHRAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQ
QERFLQVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWT
KQVLSIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFAISHFDHPWLLKH
FAFLYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADVIHQNRVME
GPGQAGKGQRWCTLHTEFIWYDPSLIAKAPSDYGTSRLHHFEDWGVVTYGSALPADTNHT
FVSFKSGKLGGRAIFDIVHRSKYKEWIKGWRNFNAGHEHPDQNSFTFVPNGFPFITEALY
GPKYTLLNNAVLFGSAVSGSCFKPWAGQVTEACDSKWLKYKVGLAADAQGRVEAAMERQG
MVFIRGEAHSAYNPELKIRNFQRNLLLLHPQLLLLVDHIHLEPDSPTRAMSAFFHNTEVP
FQSTKIDGVHGAFVSHGEDKYKMFWMDDTGFSNKGVTGYWNYPRGYPYNGSNYVNITMPL
RYPHTRVAYIFYGPGVDVQSFSLRGDNQRVDIYLATKDHTYTIYLLTGEVTSKPLFAMVL
LDHKKIVFEKEAAAVDSSPEEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNTASFRKT
AERLLQFSDKRKTEEVIEKMFAMSKKQGKGKGGKKVSIGDKLSESLPDIFAQIEINEKKE
RQKTSKRIYEDSPDEGDAESRAFIDYTDSRKNRKGVFVKGRKFKEVHMVATAGSESLLST
ASYIRLFLLLNTATFFLLLAVLLTRFQKGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQ
C
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagaacctacacacgtggggcacccaccgtcttcttcataagtctcctgtggctccta
ctcgtcccggcggaggtggaggcagtggcggcgacggaaggggaccccagcggggaaatc
cccttcatgggaggcaactatgacggacaccccatgctgtacttcagtcgtggggacgtg
gaggagctgcagtacgcggccacggggacacaccgggatatggcgaggaggatccgcgag
gccggggaaaccatgctggagcacccagaggagtacctgcccccctggagtcctgcagac
ttcagcgcccgctggaacgaggtgtatggaaacaacctgggtgtgctgtccatgttctgt
ctgctttacccacacagggccggagccctcgacctggccaaggactacatggagaggatg
gcggctcagcctagttggctggtcaaagacgctccctgggatgaggttccgttggcgcac
tctctggtcggctttgccaccgcctacgacttcctgtacgagtacttgaacaagggtcag
caggagcgcttcctgcaggtgatcggcaacgcttcgcgcctcatgtacgagaagtcgtac
gtgcggggttgggggttccagtacctgcacaaccaccagcccaccaactgtgtggctctg
ctcacaggaagcctggtgtacatgacacaaggttaccttcaggaggcctacctgtggact
aagcaggtgttgtcaatcatggagaagtccatggtcctcctgcaggatgtgacggacggc
tccctgtatgagggcgtggcctacgggacttacaccacccgctctctgttccagtacatg
ttcctggtgcagcgccactttgccatcagccacttcgatcacccctggctcctcaaacac
tttgccttcctctacaggacaatcctgcctggattccagcggaccgtagccattgcagat
tccaactacaactggttctacgggccagagagccagctggttttcttggaccgctacgtg
ttgcgtaatggcagtggaaactggctggcagatgtgattcatcagaacagggtgatggaa
gggccagggcaggctgggaaaggccaacgctggtgtactctccacacagaattcatctgg
tatgacccgagcctgatcgccaaggccccatctgattatggaacatcccgactccaccac
tttgaggactggggtgtggtcacgtacggcagtgctttacccgcagacaccaatcacacc
tttgtctccttcaagtcagggaagctgggaggacgtgccatctttgacatcgtccacagg
agcaagtacaaagagtggatcaaagggtggaggaacttcaacgctggccacgagcaccca
gatcagaactctttcacttttgtgcctaatggcttcccattcatcacagaggcactctat
ggacccaagtatactttgttgaacaatgcagtcttatttggctcggcagtctcagggagt
tgctttaagccgtgggccggacaggtgacggaggcatgtgactccaagtggttgaagtac
aaggtggggctggcagccgatgcccaaggcagagtagaggccgccatggaaagacaggga
atggtctttatccgaggcgaggcgcattctgcttacaatccagagctgaagatcaggaac
tttcagaggaacctgctccttcttcacccacagctcctgcttctggtggatcacatccac
ctggagcctgacagcccaaccagggccatgagcgccttctttcacaacacagaggtgcca
ttccagagcacaaagatagatggcgttcacggagcatttgtgtcacatggtgaagacaag
tataagatgttctggatggatgacaccggcttcagtaacaaaggagttacaggttactgg
aattacccgcgagggtacccatataacggctctaactatgtgaacatcacaatgccgttg
agatatcctcatacaagggtggcctacattttttatggaccaggggtggacgttcagagc
ttcagcctgcgtggtgacaatcagagagtggatatttaccttgctaccaaagatcacact
tacaccatctacctgctgacaggcgaggtcacgagtaagcctctgtttgccatggtactg
ctggaccacaagaagattgtatttgagaaggaggccgctgctgtggacagctcaccagag
gaagtggaggagtacgtcaacgtcatggaggacaacctccagcatgtcaagcctgtcttc
cagcagatggagagacacatcctgggaagggtcctcaacactgccagcttccgaaagact
gccgagcgcttgctccagttctctgacaaaaggaagaccgaggaggtcattgagaagatg
ttcgctatgtccaagaagcagggcaagggtaaaggggggaagaaagtcagcatcggggac
aaactttctgagagtctgcctgacatttttgcacagattgaaatcaatgagaagaaggag
agacagaagacatcgaagcgtatttatgaggacagtccagacgagggcgacgcagagtca
cgggccttcatagattacacagacagtcgcaagaacagaaaaggcgtctttgtcaaaggc
cgtaaattcaaagaggtccacatggtggccacggcagggagcgagagtctcctcagcaca
gcctcctacatcagactcttcctcctgctcaacactgctaccttcttcttactgctggct
gtgttactgacgcgctttcagaaaggtcggagcttgcacacacagaggtgtttctacacc
atccttctgattgactgcttcatcttactgtacctctactcttcctgctctcacacacag
tgctaa
DBGET
integrated database retrieval system
