Solea senegalensis (Senegalese sole): 122785625
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Entry
122785625 CDS
T07721
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122785625 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122785625 (eftud2)
Spliceosome [BR:
ssen03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122785625 (eftud2)
Complex C
U5 SnRNP specific factors
122785625 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
122785625
NCBI-ProteinID:
XP_043907445
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All DBs
Position
LG19:complement(9635879..9648830)
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDELDAEDRDVDEGDDDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVRNRRFTLMEQELPATVYDMEFLAD
LMDGTELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGAKTKIEHTYAGGMDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDALIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgatgagtttggaaactacatcggtccagagttggactctgat
gacgatgaagacgagctggatgcagaggacagagatgtcgatgagggtgatgacgatgat
gacgatgaacctgctgatgctgatgatgatgtcccgggaatggaggtggttctgcacgag
gataagaaatactatcctacagcagaagaagtttacggtcctgaagtggaaacgatcgtc
caggaggaagatactcaacctcttactgaacccatcattaagcctgtgagaaacagacgg
ttcactctgatggagcaagagttacctgccactgtttatgatatggaattccttgcagat
ctaatggacggtactgagttgatccggaatgtcactctctgtggtcacctccaccatggc
aagacctgttttgtagactgcctcattgaacagactcacccagaaatcaggaagagagat
gatgtggatcttcgatacacagatatcctattcacagagcaggagagaggagttggtatt
aagagtactcccgtcacaatggtgctgccagattccagaggcaaatcctacctctttaac
atcatggacacaccaggccatgtaaacttctcagacgaggtcacgtctagcatccggatc
tcggatggtgttgtcctcttcatagatgcagcagagggagtaatgctgaacacagagcgg
ctcatcaaacatgcagttcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcatcgtggagcttaaactgccacccacagatgcttattataaactgcgccatatt
gtagatgaggtcaatggtttgctcagcacatactccacagatgagaatttggtggtgtct
cctctccttggaaacgtgtgcttcgccagctctcagtacagcatctgtttcacacttggc
tcttttgcaaaaatctactcagacacttatggagacattaactataatgagtttgccaag
aggctctggggagacatttacttcaatcccaaaactcgcaagttcacaaagaaagctccc
agcagcaactctcagcgcagctttgttgaatttgttctggagcctctctacaagatcctc
tcacaggtggttggggatgtggacacatccctccccagagttctggatgagctgggaatc
catctgaccaaagaggaactgaagctgaacattagacccctgctgaggctggtctgcaat
cgcttcttcggagaattcaccggatttgtggacatgtgtgttcagcacatcccttcacca
caagagggtgccaagaccaagattgagcacacctacgcaggaggtatggactccgacctg
ggggaggccatggcagagtgtgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcactgaggatggggttcagttccatgcatttggcagggtgctaagcggcaccatt
caggcaggacagccagtcaaggtcttgggagagaactacacccttgaagatgaggaggac
tcccaggtctgcactgtgggacgcctgtggatttctgttgccagatatcaaattgaagtg
aatcgagtacccgctggtaactgggtcctcattgaaggctgtgaccagccaattgttaaa
actgccaccatcacagagcccagaggcaatgaagaggctcagattttcaggccactgaag
ttcaacactgcgtcagttatcaagatcgcagtggaacccgtcaacccatcagagcttccg
aaaatgctggacggactgaggaaggtcaacaagagctatccatctctaaccacgaaggtg
gaggagtctggagaacacgtaatcttaggcacaggagagctctacttggactgtgtcatg
cacgacctgaggaagatgtattcggagatcgacattaaagtcgcagatccagttgtgaca
ttctgtgaaacagttgtggaaacatcatctctcaagtgctttgctgaaacgccaaacaaa
aagaataagatcaccatgattgctgagcccttggagaaggggctggctgaggacattgag
aatgaagtggtgcagatcacatggaacaggaagaagctgggagagtttttccagacaaag
tatgactgggatctgctggctgccaggtctatctgggccttcggaccggacacgacggga
ccaaacattcttgtggacgacacgctgccttctgaggtggacaaggctctgctcggctca
gtcaaagacagcatcgttcagggcttccagtggggaaccagggaaggacctctgtgtgat
gagcccatcaggaatgtcaagtttaagattctggatgcactcattgctcaggagcctctc
cacagaggtggaggccaggtcatccccacagctaggagagttgtctactccgctttcctc
atggccactccaaggctgatggagccatactactttgtggaggttcaggctccagcagat
tgtgtatctgctgtgtacactgtgttggctcgaagaagaggtcatgtgactcaggacgca
ccgattccagggtctccactctacaccatcaaagctttcatcccagccattgactccttt
ggatttgagacagaccttcgcacacacacacagggacaagcctttgctctgtctgtcttc
caccactggcagattgttcctggtgaccccctggacaagagtatcgtgatcaggccactt
gagcctcagcccgccccccatctggccagagagttcatgatcaagacccgaaggcgcaag
ggactgagcgaagatgtgagcatcagcaagttcttcgacgatcctatgttgttggagctg
gccaaacaggatgtggtgttaaactaccccatgtga
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