Solea senegalensis (Senegalese sole): 122785707
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Entry
122785707 CDS
T07721
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03272
Virion - Hepatitis viruses
ssen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122785707 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122785707 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122785707 (ldlra)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122785707 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF
Vgb_lyase
hEGF
Motif
Other DBs
NCBI-GeneID:
122785707
NCBI-ProteinID:
XP_043907556
LinkDB
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Position
LG19:17388130..17397543
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AA seq
899 aa
AA seq
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MGRLCYTPLLLLFLSFFETNALTACGTEQFQCGNWKCLPLTWVCDGTDDCGDGTDELPGT
CSAKTCKPAEFSCQDRLNQCIPSAWRCDGTADCQNGADEDGTCVPKQCTRDEFRCRNGQC
VSASFVCDDEADCDDRSDEDSCPPITCSASAFQCNNSVCVPRLWACDGDSDCSDGSDEWP
QNCGTKTPAVTAAHQCSSLEFHCGSGECIHGNWKCDGGADCLDRSDEENCARKTCRPDEF
ECGDGTCIHGSRQCNHQYDCRDRSDEAGCVNATHCDGPTRFKCRSGECISMDNVCDNRRD
CRDWSDEPLRECGFNECLFNNGGCSHTCKDLKIGYECLCPAGFRLVDQKRCEDIDECAEA
DVCSQICINHDGGYKCECEEGYQVDPSTKACKAVGTVAYLFFTNRHEVRKMTLDKSEYTR
VIPRLKNVVALDVNMATKDIYWSDISQKKIYRARLDSAEDSTQHSIVIGSDIDAPEGLAY
DWIHGNLYWTDSIRGTISVVTADGHRRKTLFHQDLLKPRAIVVDPHSNFIYWTDWGSPAK
IERSGLNGGDRTALVTDNIEWPNGITIDLLNQRLYWVDSKLHSLSSIDVQGGGRRTLIID
ENKLAHPLGLTVFEERVFWTDVSNNAILSANMLTGDDITPVAENLSSPEDIVLYHNLKQP
SGRNWCEVSNGGCEFMCLAAPQVGTHPPKYTCVCPDNMMLAGDMRTCVPAVPTSAAPVPP
QNPTDAPRLPPVPPRTTPRTVPKPQIHTTITVPTVNTKPALRTIKPLLRITTPKPSTPSP
QPVIPKISQTTTDAPTTSPGVRPGFVAAIPNTASTTPIALYIVLPLAIICLVVVGGLLLW
RNYRLKNTNTIHFDNPVYQKTTEDQVHIWRSHSLDGYSYPKRQVVNLNEEADNPAFTEN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgggacggctgtgttacacgcccctgctgcttctcttcctctctttctttgagacaaat
gcactgacagcatgtggaacggagcagttccagtgtggaaactggaaatgcctcccactc
acctgggtgtgtgacggcacggacgactgtggagacggcacagatgagcttcctggtacc
tgttccgctaaaacgtgtaaaccggcagaattcagctgccaggaccgtctcaaccagtgt
atacccagcgcatggcgctgtgatggaacggctgactgtcagaatggagcagatgaagac
ggcacgtgtgtgcccaagcagtgcacaagggacgagttccgctgcaggaatggccagtgc
gtgtccgcgtcctttgtgtgtgatgacgaggccgactgtgacgaccgcagcgacgaggac
tcctgtccgcccatcacctgcagcgcctcagcctttcagtgcaacaacagtgtttgtgtg
ccgcgcctgtgggcctgcgacggcgactcggactgctctgacggctcggatgagtggccc
cagaactgtggcacaaagacccccgccgtcactgccgctcatcagtgctcctcactggag
ttccactgcggcagcggcgagtgcattcacgggaactggaagtgtgacggaggagctgac
tgcctcgatcgatcagatgaagagaactgtgctcgtaagacctgtcgtcccgatgagttt
gaatgcggcgatggaacttgcatccacggtagccgccagtgcaaccatcagtacgactgc
agggacaggagtgatgaagccggctgtgtcaatgcaacccactgtgacggcccgaccagg
tttaagtgccgcagtggggagtgcatcagtatggacaacgtgtgtgacaaccgtcgcgac
tgcagggattggtcagatgagcctctccgagaatgtggctttaatgagtgcctgttcaac
aacggcggctgctctcatacctgcaaagacctgaagatcggctacgagtgcctgtgtcct
gctggattcaggctggttgaccaaaaacgatgtgaagatatcgatgagtgtgccgaagcg
gacgtctgcagccaaatctgcatcaaccatgacggcggttacaaatgcgaatgcgaggaa
ggttaccaggttgacccgtccaccaaagcctgcaaggccgtcggtacagtagcctacctt
ttcttcactaaccgtcatgaggtcagaaagatgaccctggacaagagtgagtacaccaga
gtaatcccccgcctcaagaacgttgtcgctttagacgttaacatggccaccaaagacatc
tactggtccgacatctctcagaagaaaatctacagagctcggttggactcagctgaagac
tcaactcagcacagcatcgtgatcggcagtgacattgatgctcctgaaggccttgcctac
gactggatccatggtaatttgtattggaccgacagcattcgcggcactatctccgtagta
acggccgatggtcaccgtcgcaaaaccctcttccaccaagacctgctgaaacctcgtgcg
attgtggtcgacccccacagcaacttcatctactggacggactggggaagtccagcaaag
attgaaaggagtggtcttaacggaggagaccgcactgctctggtcaccgacaacattgag
tggcctaatggaattacaattgacctgttgaaccagcgtctctactgggtggactctaag
ctgcactccctctccagtattgacgtgcagggcggcggtcgacgcacgctcatcattgac
gaaaacaagctggctcacccgctgggactcactgtgtttgaggagagagttttctggaca
gacgtcagcaacaatgccatcctcagtgcaaacatgctgacgggtgacgacattacacca
gtggcggagaacctatcatcgccagaagacattgttctctaccacaacctcaaacaacct
tctgggaggaactggtgtgaggtgtccaatggtggctgtgaattcatgtgtctggccgct
cctcaagtgggcacacatcctcccaaatacacctgcgtctgtccagataacatgatgcta
gccggtgatatgaggacatgtgtacctgctgtgccaacatctgcagctcccgtgccacct
caaaatcccactgacgcccctcgtcttccaccagtgccacccaggaccacacccaggacc
gttcccaaaccccagatccatacgactattacagttcctactgtaaacaccaagccagca
ctacgcaccatcaagcctctgctcaggatcaccacaccaaaaccaagcaccccttcaccg
cagccggtgataccaaagatttcccagaccaccacagatgctccaactacctctccaggt
gtccgacctggatttgttgcagccatacccaacactgcctccaccaccccgatagccctg
tacattgtcttgcctctggcgatcatttgtctcgtggttgttggtggcctgctgctgtgg
aggaattaccggctgaagaataccaacacaattcactttgacaacccggtctaccagaaa
actactgaggaccaagtgcacatttggaggagccacagtctcgatggttactcttaccca
aaaagacaagtcgtgaacctaaacgaagaagcagacaatccggccttcacagagaactga
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