Sporomusa silvacetica: SPSIL_012250
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Entry
SPSIL_012250 CDS
T10425
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00270
Cysteine and methionine metabolism
ssid00450
Selenocompound metabolism
ssid01100
Metabolic pathways
ssid01110
Biosynthesis of secondary metabolites
ssid01230
Biosynthesis of amino acids
Module
ssid_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SPSIL_012250 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SPSIL_012250 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssid01007
]
SPSIL_012250 (patB)
Enzymes [BR:
ssid01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
SPSIL_012250 (patB)
Amino acid related enzymes [BR:
ssid01007
]
Aminotransferase (transaminase)
Class II
SPSIL_012250 (patB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
XFO65116
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Position
complement(1261870..1263057)
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AA seq
395 aa
AA seq
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MMTNSKIDKFDTVIARHNSGSTKWDDAPALFGSKDVLPFWVADMDFPSPPAVNEALAARV
QHGVFGYPSPHSYAYDAVTDWLDKRHNWKTNPEWMVSTPGVVTAITLAVQTFTKPGDKVI
IQPPVYPPFFSSVHNQDRIVLENPLVYEDGNYYIDFDDLAEKAREAKMLILCNPHNPVGR
VWSRSELTKLVKICLENNVLLLTDEIHGDLVYTGHQYIPLASLDTDSDDKIITLTAPSKT
FNTAGLYTSIAIIPNSKLRSQFSQTVQQLGISKSNVFGITALEAAYRHGAPWLDELLVYL
EDNAQYLTEYIAANIPSIKVDKPQGTYLAWLDCRNLKLSQQELVQFFAKKARVGLNDGVT
FGHQGTGFMRLNFGCPRPLLAEGLKRIAQAVNQSI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatgactaactccaaaattgacaaatttgacactgtgattgcgcgtcacaacagcggc
agtaccaaatgggatgacgctcctgccctctttggttccaaggatgtactgcccttctgg
gtagctgacatggatttcccttcgcctccggccgtaaacgaagctctcgccgcccgggtt
cagcatggcgttttcggttacccatctccccattcctatgcctatgatgccgtaactgac
tggctggataaacggcataactggaaaaccaatcctgaatggatggtaagtactcctgga
gtggtaactgctataaccttggcagtgcagacctttactaagccgggagataaagttatt
atccaacccccggtttatccccccttcttttccagtgtacacaaccaggaccgcatcgtg
ctggaaaaccctttagtttatgaagatggcaactattacatagattttgatgacttggca
gaaaaagcccgcgaagccaaaatgcttattttatgcaacccgcataatccagttggccgg
gtttggtcgcgctcagagctaaccaagctggtaaaaatctgcctggaaaacaatgtattg
ctgctgacagacgaaattcacggcgatttagtgtataccggccatcagtatataccgctg
gcttccttagacactgacagtgacgacaaaataatcacgcttaccgcccccagcaaaact
tttaacaccgctggcttatatacctcgattgctattattccgaatagcaaattacgcagt
caattttctcaaactgtccagcaattgggcatcagcaaaagcaatgtatttggtatcacc
gctctggaagctgcttaccgccatggggcgccgtggcttgatgagttgttagtctacctt
gaagacaacgcccagtatctgacagaatatattgctgccaatatcccatcaattaaagtt
gacaaaccacaaggtacctatttagcctggctggattgccgcaatttaaaactttcccaa
caagagcttgtccaattctttgcgaaaaaggcaagggttgggcttaatgacggcgtaacc
tttggtcatcaaggtactggttttatgcgccttaattttggttgcccgcgcccgctgtta
gcggaaggactgaagcgaattgcccaggccgtcaatcagtctatataa
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