Sporomusa silvacetica: SPSIL_042720
Help
Entry
SPSIL_042720 CDS
T10425
Symbol
capD
Name
(GenBank) UDP-glucose 4-epimerase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.115
]
Organism
ssid Sporomusa silvacetica
Pathway
ssid00541
Biosynthesis of various nucleotide sugars
ssid01100
Metabolic pathways
ssid01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SPSIL_042720 (capD)
Enzymes [BR:
ssid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SPSIL_042720 (capD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NmrA
RmlD_sub_bind
NAD_binding_4
KR
adh_short
F420_oxidored
Shikimate_DH
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
XFO68052
LinkDB
All DBs
Position
complement(4359163..4360185)
Genome browser
AA seq
340 aa
AA seq
DB search
MFKGKTILITGGTGSFGNAVMKRFLNTDIAEIRIFSRDEKKQDDMRKLYKNDKLKFYIGD
VRDLASVKNAIHDVDYIFHAAALKQVPSCEFFPLEAVKTNILGTDNVLTAAIECGIKKVI
CLSTDKAAYPINAMGISKAMMEKVFVAKSRTISSDRTLICGTRYGNVMASRGSVIPLFIE
QIKSGQPITITDPYMTRFLMSLDEAVELVLFAFENAEAGDIMVQKAPASTIGDLAQAIKE
VFHAENEIKIIGTRHGEKLYETLLTKEEYLVAEDMGGFFRIPADKRDLNYDKYFVVGNQR
LSTSDEYNSHNTERLNINQIKEKLLQIKDIQFELERWGRY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaggtaaaaccatattgattacaggcggaactggttcattcggaaatgctgta
atgaagagatttctaaatacagatatagccgaaattcgtattttttcaagagatgaaaaa
aagcaagatgatatgaggaaattgtataaaaatgataaattaaaattttacataggcgat
gttagggacttagctagtgtaaaaaatgctattcatgatgtggattatatatttcatgct
gcagctttaaaacaagtaccctcatgcgaattttttcctcttgaagcagtgaaaaccaac
atactaggaactgacaatgtacttacagcagctatagaatgcgggataaaaaaggtgatt
tgcttgtcaacggacaaagctgcttatcctatcaatgctatgggaatttcaaaagccatg
atggaaaaagtatttgttgcaaaatcaagaacaatatcatcagatagaactctaatctgt
ggtacccggtatggaaatgttatggcatcgagagggtcagtcatcccacttttcattgaa
caaataaaaagtggacaaccaattactattactgatccttatatgactaggtttcttatg
agtcttgatgaagctgtagagttagtattatttgcgttcgaaaatgctgaagcaggtgac
attatggtgcaaaaagcaccagcatctactattggtgatttagcacaagctataaaagaa
gtatttcatgctgagaatgaaatcaaaattattggaacacgtcatggtgagaaattgtat
gaaacacttcttactaaagaagaatatttagtggcagaggatatgggaggatttttcaga
atacctgcagacaagcgagacttaaactatgataaatatttcgttgtaggtaatcaaaga
ctatcgacttctgatgaatataactctcataatacagaacggcttaatatcaatcaaatc
aaagaaaagttgctgcaaattaaagacatacagtttgaattagaacggtgggggaggtac
tga
DBGET
integrated database retrieval system
