Sphingobacterium siyangense: JVX97_00215
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Entry
JVX97_00215 CDS
T08059
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JVX97_00215 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssiy03400
]
JVX97_00215 (nth)
Enzymes [BR:
ssiy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JVX97_00215 (nth)
DNA repair and recombination proteins [BR:
ssiy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JVX97_00215 (nth)
Prokaryotic type
JVX97_00215 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF763
DUF2400
HHH_8
POLQ_helical
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QRY60552
LinkDB
All DBs
Position
44970..45647
Genome browser
AA seq
225 aa
AA seq
DB search
MLKQERYKAFVDYFSKNSPDAQTELNYSNPFELLVAVILSAQCTDKRINQVTPKLFARYP
DAHSLAASSVDEVFSYIRSVSYPNNKAKHLVGMAQLLIEKFNNIVPEKIEDLVKLPGVGR
KTANVISSVVYHNPAMAVDTHVFRVANRLGLTYRATTPLAVEKQLVKNLPKDTIAIAHHW
LILHGRYICLARKPLCEKCPITYMCKYFEKNHHIKSVSAIPETKN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaagaacgatacaaggctttcgtagattatttctccaaaaatagtcctgac
gcacagacagaactcaactatagtaatccatttgaattactggttgccgttattttatct
gcacagtgtacagataaaaggatcaaccaagtcacgcccaaattgtttgcacgctaccca
gatgcacacagcttggcagcttccagcgtagacgaggtgtttagctatatacgatctgta
agctatccgaataacaaggccaaacaccttgtggggatggctcagctactgattgaaaag
ttcaacaatattgtacccgaaaaaattgaggatcttgtgaaacttccaggtgtaggtcga
aaaactgctaatgtcatttcctctgttgtttatcataatcccgctatggccgtagatacc
catgtttttcgtgttgcaaaccgtcttgggctaacttatcgtgcaacaacaccattagct
gtggaaaaacaattggtaaaaaatctacctaaagatacgattgccattgcccatcattgg
cttatcttacacgggcgttatatatgcctggcccgaaagccactgtgtgagaaatgccct
atcacttatatgtgcaaatactttgaaaaaaatcaccatataaaaagtgtctcagctata
ccagagacaaaaaactaa
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