Sphingobacterium siyangense: JVX97_15230
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Entry
JVX97_15230 CDS
T08059
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy01501
beta-Lactam resistance
ssiy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX97_15230
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX97_15230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_15230
01504 Antimicrobial resistance genes [BR:
ssiy01504
]
JVX97_15230
Transporters [BR:
ssiy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JVX97_15230
Antimicrobial resistance genes [BR:
ssiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JVX97_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QRY55394
LinkDB
All DBs
Position
complement(3597873..3600956)
Genome browser
AA seq
1027 aa
AA seq
DB search
MNLSAVFIKRPVLTIVVNITIILFGYIGFSFLGVREYPSIDPAIVSVRTNYAGANPDIIE
SQITEPLEKAINSIDGIRNISSSSNQGSSNITIEFDLKKNLEEAANDVRDKVSQAVRSLP
QDIDAPPVVSKADADSDPIITLTLQSETRDKLSLSDYAENVISERLQTIPGVSSTQIYGQ
KRYAMRLWLNPDRMAAYGITASDIRTALNSQNVELPSGKIVGNTTELTVKTVGNLSTPEQ
FNNIILKADSSRIVKFIDIGRAEIDAENLETKMVSNGKQLVGIAIIPQPGTNYLDIANNF
YKMLDQIKEDLPQDIILNIASDNTTFIKKSVEEVAETLLISIILVTLIIYFFFRDWGIAL
RPLLDIPVSLIATFFIMYIFGFSINVLTLLAIVLATGLVVDDGIVVTENIFKKVEEGMSP
IEAALKGSKEIFFAVISISITLAAVFLPVIFLQGFVGRLFREFGVVIASAVLVSAFVSLT
LTPMLNAYLIKGGGHKKTKFYDWTEPMFVKMNKGYANALEKFMKFKWISFPILILCFVII
GILFSSIKKETAPYDDRSSISVNVTGPEGATYEYMDRYMQDLDKLVYDSIPENKISLNIT
SPGFGASSVNSGRIRMTLVDPEERKKSQDDIAKELTKWTKKYDGVRVNVSQTPTISMNRR
GGLPVQYIIQAQNFEKLQEKIPEFMNEVNSDPAFSTTDINLKFNKPELHVEIDRLKALSL
GVSVLDVSQSLQLLLSGQRFAYFMRDGKQYQVIGQVENDRRATPTDLASIYVRNNLGQLI
QLDNVVSVKEESSPPQLYHNNRYMSATVSAGLAPGMSMSDGIAAMDRIKEKVLDQSFTTD
LSGESRDFVESSSNTLFAFGLALLLIYLILAAQFESFLDPFIIILTVPMAVAGALISLWL
FDQTWNIFSQIGTIMLIGLVTKNGILIVEFANQMREEGMEKFEAIMHSAESRLRPILMTS
LAIALGALPIAMSLGAASTSRIGMGVVIVGGTIFSLILTLFIIPAIYYMWSRQKKHRPEF
DNIKSYE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatctgcagtttttattaaacgtcctgttttaactattgtcgtcaatattacc
atcatattgtttggctatattggttttagttttctaggcgtacgcgaatacccctccatt
gacccagcgattgtttccgtcagaacaaactatgccggtgccaatccagatatcattgaa
tctcagattaccgagccgctagaaaaggccataaactcgatcgatggtatccgcaacatc
tcttcttcgagcaatcaaggatccagtaatatcaccattgagtttgacttaaaaaagaac
cttgaggaagccgcaaatgatgtccgggataaagtatcccaagccgtgcgaagcctgcca
caggatattgatgccccaccggtggtatccaaagccgatgcagactccgatcccattatt
acattgacattgcaaagtgagacgcgcgataaactttcgctgagtgactacgccgaaaat
gtgatttccgaaaggttgcaaaccatccccggtgtcagcagcacacagatctatggtcaa
aaacgttacgccatgcgtctatggctcaaccccgaccgtatggctgcctatggtatcacg
gcttcggatattcgtacggcattgaatagccagaatgttgagttaccttcggggaaaatt
gtcggaaacacaaccgaactcaccgtaaaaaccgtcggcaacctgtctacccccgagcaa
ttcaataacatcattttaaaggccgatagcagccgtatcgtcaagtttatcgatattggc
cgggcagaaatagatgctgaaaatctcgaaacaaaaatggtcagtaacggtaaacagctg
gtcggtattgccattattccgcagcccggaacaaattacctcgatattgccaacaatttc
tataaaatgctcgatcagatcaaagaagatctgccccaggatattatactcaacatcgct
tctgataatacgacattcatcaaaaaatctgttgaggaagtcgccgagacactcctgatt
tcgatcatcctggtcaccctgattatctattttttcttccgcgactggggtatcgcacta
cgtcctctattggacattcccgtatccttgatcgcgacattctttattatgtatattttc
ggattttccatcaatgtactgacgctgctcgctattgtactcgcgacgggacttgtcgtc
gacgacggtatcgttgttaccgaaaatatcttcaagaaagttgaagagggaatgtcccct
attgaggcggcactgaaaggatcgaaggaaatattcttcgctgttatttccatttcaatc
acactcgcagccgtattcttacccgttatatttcttcagggctttgtgggacggcttttc
cgggagtttggtgtcgtcatcgcctcggccgtattggtttccgcatttgtttccctcacc
ctcacgccgatgctcaatgcctatctaatcaaaggcggtggacacaagaagacaaaattt
tacgattggacagaacccatgttcgtcaaaatgaataaaggttatgccaatgcgctggaa
aaattcatgaaattcaaatggataagctttccaattctgatcctatgttttgtgattatt
ggcatccttttctcctccattaaaaaagaaacggcaccttatgatgacaggagcagcatt
tctgtcaacgtgacgggccctgagggtgccacttatgaatacatggaccgatacatgcaa
gatctggataaattagtctatgactccattcccgaaaacaaaatcagtttaaatattacc
tccccgggtttcggcgcaagctcagtcaactccggacgtatacggatgacactggtagat
cctgaagaacgtaaaaagtctcaggatgatattgcaaaagaactgaccaaatggacaaaa
aaatacgatggtgtccgcgtcaatgtttcgcaaacgccaacgatatccatgaatcgaaga
ggtggattacctgttcagtacattatccaggcacaaaattttgaaaaactacaggaaaag
atacccgaatttatgaatgaggtcaacagcgatccagcattctccacaacggacatcaac
ctgaagttcaacaaacccgaactgcatgtcgaaattgatcgtctgaaagccctcagtctg
ggcgtttccgtacttgacgtttcgcagtccctccaattgttgctaagcggtcaacgtttc
gcctattttatgcgtgatggcaaacaatatcaggtcataggccaggttgaaaacgaccgt
agagccacacctacagaccttgcgtcaatttacgtgcgtaataacctcggacagcttatt
cagttagacaacgttgtaagcgttaaggaagagagcagtccaccccaactctaccacaat
aaccgttacatgtcggctacagtttcagccggtttggcgccgggcatgagtatgagtgac
ggcattgcagcaatggatcgcataaaagaaaaggtgctcgatcagagtttcaccaccgac
ctcagtggcgaatcacgtgacttcgttgaaagtagttccaatacactatttgcctttggt
cttgctttgttgcttatctacctgatcttagctgcccaatttgaaagcttcctcgaccca
tttatcattatccttacggtacccatggcggttgccggagcactgataagtctatggtta
tttgatcaaacctggaatatattcagccaaattggaacgattatgctaattggtctcgtg
acaaaaaatggtatcttgattgttgagtttgccaaccagatgcgcgaagagggaatggaa
aaatttgaggcaattatgcactctgccgaatcacgcctcagaccgatcttaatgacaagt
ctagccattgccttgggcgcattaccgattgccatgtcacttggtgctgcttcaacgagt
agaattggtatgggggttgttatcgttggtggtacaatattctcccttattctaaccttg
ttcattatcccggcaatctattacatgtggtcaagacaaaaaaaacatagacctgaattt
gataacattaaaagctacgaataa
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