Sphingobacterium siyangense: JVX97_17470
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Entry
JVX97_17470 CDS
T08059
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy01501
beta-Lactam resistance
ssiy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX97_17470
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX97_17470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssiy03036
]
JVX97_17470
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_17470
01504 Antimicrobial resistance genes [BR:
ssiy01504
]
JVX97_17470
Chromosome and associated proteins [BR:
ssiy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JVX97_17470
Transporters [BR:
ssiy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JVX97_17470
Antimicrobial resistance genes [BR:
ssiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JVX97_17470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
Biotin_lipoyl
BSH_CusB
YknX_C
BSH_CzcB
BSH_YknX
HH_MFP_RND
HH_EMRA
CzcB_C
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
QRY55812
LinkDB
All DBs
Position
4104456..4105538
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AA seq
360 aa
AA seq
DB search
MKRVFMLASLAISLCQIGCTSKKEEKEEKEKFTATSPVQMDTTIRKDFVSQIRSFRNIEL
RAQEKGYLEQIFVDEGQFVHKGQLLFRIMPKMYEAEYRKSSAEVNVAEIEVQNTKTLADK
NVVSPNELAMAKAKLEQAKAEAAIAKLHLSFTEIRAPFDGTIDRIPLKLGSLVDEGELLT
SLSDNSEMLVYFNVSEPEYLSYQTNVSKRGDTHVGLLLANNELFAQNGLVETIESEFNSE
TGNIAFRAKFPNPNRLLKHGESGKVVMNFPLKQVLIIPQKATYEMQDRKYVYVVDKDGKL
KARHITIGNSLPDLYVVTSGLQKDDKFLLDGIQKAKEDDKINYSFVQPKDAISNLKLKTE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtatttatgctcgctagtttggctattagcttatgccaaatcgggtgtact
tccaaaaaggaagaaaaggaagaaaaagagaaatttacagcgacctctccggtacaaatg
gatacaactatccgtaaggattttgtctcccagattagatctttccgaaatattgagctt
cgggctcaagagaaaggctatcttgagcagattttcgtggatgaaggacaatttgtccat
aaagggcaactcctttttcggattatgccgaagatgtatgaggccgaataccgcaaatct
tctgcagaagttaatgtagcagaaattgaagttcaaaatacaaaaacattagctgataaa
aatgttgtatcgcccaacgaactcgctatggctaaagcgaagcttgagcaagccaaagct
gaggcagcgattgcaaaattacatctctcctttacagaaatcagggcaccttttgacgga
acgattgatcggattccattgaaattgggaagtttggtggatgaaggcgaattattgaca
agtctgtccgataatagtgagatgttggtttatttcaatgtttccgaaccagaatattta
agttatcaaactaacgttagtaaacgcggggatacccatgtgggcctgctactggccaat
aatgaactatttgctcaaaatggtcttgtagagaccatagaaagtgaatttaacagtgaa
acaggaaatattgcttttagagcgaaatttcccaacccaaaccgtctattaaaacatggc
gagagcggtaaggtggtgatgaactttccgttgaaacaggttttaattattccacagaaa
gcgacatacgaaatgcaggaccgtaaatatgtgtatgtagtcgataaggatggcaaatta
aaagctcgtcatatcacaatcggtaactccctaccagatctgtatgtggtaacgagcgga
cttcaaaaagatgataaatttttgttggacggtattcagaaagcgaaagaggatgataaa
atcaactacagctttgtgcaacctaaagacgccatttcaaatttgaagttaaaaacagaa
tag
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