Sclerotinia sclerotiorum: SS1G_08753
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Entry
SS1G_08753 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_08753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_08753
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SS1G_08753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
PduV-EutP
AAA_15
AAA
AAA_23
RsgA_GTPase
ORC-CDC6-like
DUF3584
AAA_28
Arf
AAA_22
AAA_25
AAA_14
AAA_13
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
5486201
NCBI-ProteinID:
XP_001589989
UniProt:
A7ETU6
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MPNSVDDQTDAPSIEVKNLTYKFPDSTLGLTDITLSLPPSSRTLLIGANGAGKTTLLRLL
SGKRLAPTSTISISGLDPFKDSLVGVTYLGLEWVLNPIVRTDIGVRELLSSVGGTYYPDR
RDELVRVLDIDLEWRMHQVSDGERRRVQLAMGLIRPWRILLLDEITVDLDLLSRKRFLDF
LKEETEKRNCTIVYATHILDNLAGWPTDLVHMSLGRVKEWGPIGKFEEEMKGDGGGNSIL
ALNMTQEGNRSAGILTLHTFTLFILHSVISFQLNSSI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccaaactcagtagatgatcagaccgatgccccttcaatcgaagtcaagaatcttaca
tataagtttccggattctactctgggtcttacggatataacactgagtttacctcctagt
tcgcgaactctattaatcggcgccaacggtgccggcaaaaccacactcctccgtctcctc
tccggcaaacgtctcgcccccacctccacaatctccatctcgggactcgaccccttcaaa
gactctctcgtaggagtgacctacctcggactcgaatgggtactcaaccccatcgtacga
accgacatcggggtccgcgaactcctctcctcagtaggcggtacatactaccccgatcga
cgggacgagctagttcgcgttctcgatatcgatctcgaatggcgcatgcaccaagtctcc
gacggtgaacgtcgtcgcgtgcaacttgctatgggcttaatacgaccctggcggatatta
ctcctggatgaaattacagtggatttagatttattgagtcgaaagagatttttggatttt
ttgaaggaggagacggaaaagaggaattgcaccattgtttatgcgacgcatattttggat
aatctggcggggtggcctacggatttggtgcatatgagtttggggagggtgaaggagtgg
gggccgattgggaagtttgaggaggagatgaaaggggatggcgggggaaattcgatatta
gcactcaacatgacacaagaagggaacaggtctgctgggatactcacacttcacactttc
acacttttcattttgcactccgttatttcatttcaactcaattcatctatataa
DBGET
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