Sclerotinia sclerotiorum: SS1G_12153
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Entry
SS1G_12153 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_12153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_12153
Spliceosome [BR:
ssl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SS1G_12153
Complex C
U5 SnRNP specific factors
SS1G_12153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
5483303
NCBI-ProteinID:
XP_001587123
UniProt:
A7F2K5
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MDDLYDEFGNFIGDAEESEEESQHGNDASAYVYDEYPEEEPEEPTGQELMDLDDEGPSNA
VILHEDKQYYPTAQQVYGEDVETMVQEEDAQPLTQPIIAPVEQKKFNIQEADLPPVHFDR
SFMSDLMNYPEQIRNIAFAGHLHHGKTAFMDMLVLETHDITERLEKKTGRKKDEQLRYTD
IHVVERERGLSIKSAPMSLVLQSTKGKSHLLNMLDTPGHVNFVDEVASSLRLVDGVVLVV
DVVEGVQVNTERIIKHAVLEGLPLTLVVNKMDRLILELKLPPTDAYFKLKHVIEEVNTVI
EATLPGQGESRRLSPEKGNVLFACTSMGWCFTLQSFAKMYADSYAPSNKRGPGLNNEESG
INAHEFARRLWGDIFYNPSRRTFTRKGVEERSKRSFVNFILEPIYKLYSHTISESPEDLK
DTLETLGIFLKPSQYRTDANVLLKLVCEQFFGPSTGFVDMVVQHIPSPVEAAEKKLERHY
TGPLDTTVGAAMKNCDQDGPLVIQITKLLNTSDATGFYSFGRVLSGIARAGTQVRVLGEG
YSIDDEEDMSVATISDVWIAETRYNIPTDGVPAGNWVLLGGVDNSIVKSATIVPLVLPNE
EEAYIFKPITHFTESVFKVAVEPINPSELPKMLDGLRKVNKSYPLITTKVEESGEHVILG
TGELYMDCVLHDLRRLYAEMEIKVSDPVTRFCETVVETSAIKCYAQTPNKKNKITMVAEP
LDQGIAEDIESGKVDKKLLLSVRDTIRQGFSWAAREGPLCEEPIRNSKFKITDVILAPEA
IFRGGGQIIPTSRRACYSSFLMASPRLMEPVYSCSMTGPADSVTSLYTVLARRRGHVLSD
GPIAGTPLYRVSGLIPVIDSFGFETDLRIHTQGQATVSLVFDRWSIVPGDPLDKDVILRP
LEPANAQATARDFVLKTRRRKGLSEDVSVAKFLEPELFTSLKETGILDG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctttatgacgagtttggaaacttcattggtgatgccgaggagtcagaggag
gagtctcagcatggcaatgatgcgagcgcatacgtttacgatgaatatccagaggaggaa
ccagaggaacctacggggcaggaattgatggaccttgatgatgaaggtccttcaaatgcg
gtgatattgcatgaagacaagcagtattatcccacggcgcagcaagtatacggagaggat
gtggaaactatggtgcaggaagaagatgcccagcccctcacgcaacctattatagctcct
gtcgaacagaagaaattcaacatacaggaggcggatcttccaccagtacatttcgatcga
agtttcatgtccgacctgatgaattaccccgaacaaatcagaaatattgcttttgctggg
catctacatcatggtaaaaccgcatttatggacatgttggttctcgaaactcatgatatc
acggagcgattagaaaagaagaccggaaggaagaaggacgaacaattacgttataccgat
atccatgttgttgagcgcgaacgcggactctccataaaatccgcaccaatgagtctagtg
cttcagagtactaagggaaagtcacatcttctaaatatgctcgatactccgggccatgtt
aatttcgtggatgaagttgcgtcttcattacgactggtagatggagtagttttggtcgtt
gatgttgttgaaggagtccaagtcaatacggaacggatcatcaagcatgcagttttggaa
ggactgcccttgactcttgttgtcaataaaatggatcgtctaattctagagctcaagctg
ccaccaacggatgcttatttcaagctcaagcatgttattgaagaagttaatactgtgatt
gaggctacattaccaggtcaaggggagagccgaagactcagtcctgagaagggcaatgtt
ctgtttgcctgtactagcatgggatggtgttttactttgcaatcatttgcgaaaatgtat
gcagatagctacgccccaagtaacaagcgaggtccgggtttgaacaacgaagagagtggt
atcaatgcacacgaatttgccaggaggctgtggggcgacattttctataacccatcaagg
agaacattcactcgaaagggtgttgaagagaggtcgaaacgctctttcgtgaatttcatc
ctggaaccaatctacaagctatactctcacactattagtgagagtccagaagatttgaag
gacactctggaaacgcttgggatcttcctgaagccatcgcagtacaggacagatgccaac
gttcttctgaaactagtatgtgaacaatttttcggcccatcaactgggttcgtcgatatg
gttgtacagcatataccttctccggtggaagcagcagagaagaaactggaacgccattat
accggtccattggatacaacggttggagcggctatgaagaattgcgatcaagatggtcca
ttggtcatacaaatcaccaagctattaaacacaagcgatgctacgggattctattcattc
ggaagagtgctaagtggtattgcacgagcaggtactcaagtgagagttctcggcgaagga
tactcaattgatgatgaagaggatatgagcgtcgccactatatcggatgtatggatcgct
gaaacaagatacaatatccctacagatggagttcccgcgggcaactgggttctgcttggg
ggtgtagataactcgattgttaaatctgcaaccattgtaccccttgttttaccaaacgaa
gaggaagcgtatattttcaaacccattactcatttcaccgagtcggtcttcaaggtggct
gtggagccaatcaacccttccgagcttcctaagatgttggatggtttgagaaaagtcaac
aaaagttaccctcttatcactacgaaggtagaggaatctggcgaacacgtcatcttaggc
acgggagaactctacatggactgtgtcctgcatgaccttcgacgattatatgcagagatg
gagatcaaggtgtctgatcctgtcacacgcttttgcgagacagttgttgagacatcagct
atcaaatgttatgcccagacaccaaacaagaagaacaaaatcaccatggttgcagaacct
cttgaccagggtattgctgaggatattgaaagtggaaaggtggataagaagttattgctt
agtgtacgggataccatccgacaaggatttagctgggctgctcgagaaggaccactttgt
gaagaaccaatccgcaatagtaaattcaaaataacagacgtgatattggctcccgaagca
attttccgaggtggtggtcagattattcccacttcccgacgcgcatgctattcttccttc
ctaatggcttctccaagattgatggaacctgtctactcctgttccatgaccggacctgca
gattccgtcacctctctctacactgtactagctcgtcgtcgcggtcacgtcttgtcggat
ggtcccatcgctggtacacccctctatcgtgttagtggtttgatacccgtcatcgattct
tttggattcgaaaccgatctccgcattcacactcaaggccaagcaactgtttctctagtg
tttgatcggtggagtatcgtccccggtgatccattagacaaggatgtaatcctcagacct
cttgaacccgcaaatgcacaagccacagctcgagattttgttctcaagaccagaagaaga
aagggtttgagtgaagatgtaagtgtggctaaattcctcgagccggaactcttcaccagt
ttgaaggagacgggaatcttggatgggtag
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