Sediminispirochaeta smaragdinae: Spirs_2893
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Entry
Spirs_2893 CDS
T01287
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00300
Lysine biosynthesis
ssm00550
Peptidoglycan biosynthesis
ssm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Spirs_2893
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spirs_2893
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Spirs_2893
Enzymes [BR:
ssm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Spirs_2893
Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Precursor biosynthesis
Amino acid ligase
Spirs_2893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADK81996
UniProt:
E1R3M5
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All DBs
Position
3091484..3092998
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AA seq
504 aa
AA seq
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MEKSLSAITGDINIEARNGKTDALISGLSYDSRTTCRGDLYFALPGLHADGHAFVEQAIA
AGARAVIHQVPLSLYHPEIAYLQVTNSRISMSPVAAAFYDHPSRVLKVIGVTGTDGKSST
VSFLHQLLTGMGLKCGFLSTVQFNTGGESVKNHFRQSTPEATEIHKTLRAMVEAGCSHAV
IESTSHGLSPKNNRLGDICYDAAVITNISHEHLEFHGTMEQYMDDKANLFRMTGQNRGIA
VINIDDKNHNLFAGTASGCRSISFYSATGAQKADYRARGIEETPASIAFTLDSPKGEARV
DLNVAGRFNVDNILAASAAVCELEGVEPKTLEPLFPGLKAVKGRMVPVDEGQAFQVIVDY
AHTPGAFRRLFPAIRPLVRGRLFALFSSAGERDLEKRPVLGSIADEYCDVIVLADEDPRG
ENPMALLEEVASGCRNKTKGKSLFLIENRKEAMRHAFSMMKKDDCILLLGKGHEGSIIYA
NGPVPWDEEEMARILLRELTGKRE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagcctatcagcaatcacaggtgatatcaacatagaagcacgaaacggtaaa
accgacgcccttatcagcgggctgagttacgacagcagaacaacctgccggggagacctt
tactttgcccttcccggtctgcatgcggatggtcatgcctttgtagaacaggcaattgcc
gccggggcaagggcggtgatccatcaggttcccctttcgctctaccaccctgaaatcgca
tatctgcaggtgacgaacagcagaatttctatgagcccggtagcggcggccttctacgat
catccgtcgagggttctaaaggtgattggagttaccggtaccgacggaaagagttcaacc
gtctcttttcttcatcaactcttgacaggcatggggctgaaatgcgggttcctgtccacg
gtccagttcaatacggggggagaatcggtaaagaaccattttcggcagtcgactcccgag
gccaccgagatccacaagaccctcagggccatggtggaggcaggctgcagccacgcggtc
attgaatccaccagccacggcctttctccgaaaaacaatcgcttgggcgacatctgttat
gatgcggcggtgatcacgaacatcagccatgaacacctggaatttcacgggaccatggaa
caatatatggacgacaaggccaaccttttccgcatgacgggacaaaaccggggtatagcc
gttattaatatcgacgataaaaaccacaatctttttgccgggactgcatccggctgcagg
tcgatctccttctacagcgcaacaggagcacagaaggccgattacagggcccgtgggatc
gaagagaccccggcatccattgcctttacccttgactctccgaaaggcgaggcacgagta
gatctcaacgtggcgggacggtttaatgtggacaacattcttgcggcaagcgctgccgtc
tgcgagctggaaggggttgagcccaaaacactggagccgctttttccgggactcaaagcg
gtgaaagggcgaatggtcccggtggacgagggtcaagcctttcaggtcatcgtcgattat
gcccatacaccaggagcatttcggcgcttatttccagccattcggccccttgtcaggggc
cgactctttgccctgttctcttcggccggagaacgtgatctggagaagcggcccgttctc
ggttccatagccgacgaatactgcgatgtcatcgtcctggccgacgaagatccgaggggg
gaaaatccgatggcacttttagaggaagttgcctcgggttgccgcaataaaacgaagggc
aagagcctctttttgatcgagaatagaaaagaggcgatgcgccacgccttttccatgatg
aagaaggatgactgcatccttcttctgggaaagggacatgaaggctccatcatctatgcc
aatggcccggttccctgggacgaggaagaaatggcaagaatactcctacgagagcttacc
gggaaaagagaatag
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