Sediminispirochaeta smaragdinae: Spirs_3789
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Entry
Spirs_3789 CDS
T01287
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00550
Peptidoglycan biosynthesis
ssm01100
Metabolic pathways
ssm01502
Vancomycin resistance
ssm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spirs_3789
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spirs_3789
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Spirs_3789
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssm01002
]
Spirs_3789
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Spirs_3789
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ssm01504
]
Spirs_3789
Enzymes [BR:
ssm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Spirs_3789
Peptidases and inhibitors [BR:
ssm01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Spirs_3789
Peptidoglycan biosynthesis and degradation proteins [BR:
ssm01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Spirs_3789
Antimicrobial resistance genes [BR:
ssm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Spirs_3789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
LRR_15
KaiA_N
Motif
Other DBs
NCBI-ProteinID:
ADK82875
UniProt:
E1R820
LinkDB
All DBs
Position
4083248..4084087
Genome browser
AA seq
279 aa
AA seq
DB search
MSTIHQKISILLPLLAAFILLSSCEDATAEEEKSPEIVYLHPEFTMTIEDLEEMTAPLPE
AIRQAILAKPQDFLELVLKVSEEPEILTILVDKNHALPEEWEPEDRVSLNDYPLAVSRKD
LSLSKAVMPHVLALNDAAKADGVTLLFSSTFRSWTYQQGLYQRYVKADGQEAADRYSARP
GHSQHQLGTVIDFGSITEAFADTKAGKWMKENAWKYGFSLSFPEGEEAVTGYMWEPWHFR
YIGPDAMALQRDFFGDSQQRTLEFLHDNKARIEAFRVQK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaatacatcaaaaaattagtatcctgttgccgcttcttgccgccttcattctc
ctgagttcctgtgaagatgcgacagcggaagaagaaaaatcccctgaaattgtatatctc
catccggagttcaccatgacaatagaggatctcgaagagatgacggcacccctgccggaa
gccattcgtcaggcaatccttgccaaaccgcaggattttctcgagctggttcttaaggtt
agtgaggaaccggaaatcctgacaatccttgtggataaaaaccatgcccttcccgaggag
tgggaaccggaagatagggtttcgctgaacgattaccccctggcggtaagtcgaaaggac
ctttccctcagcaaggccgtcatgccccatgttttggccctgaatgatgccgcaaaggcg
gatggtgtcaccctgcttttttcctcgacctttcgttcctggacctatcagcagggcctg
tatcaacgttatgtaaaagccgatgggcaggaagccgccgaccgctattcggcccggccc
ggccatagccaacaccagcttggtaccgtgatcgacttcggaagcattaccgaggccttt
gccgacacaaaggcgggaaaatggatgaaagagaacgcctggaagtacgggttctccctc
tcatttcccgaaggggaagaagcggtgaccggttacatgtgggagccgtggcactttcga
tacatcggccccgatgccatggcacttcagcgggactttttcggcgacagtcagcagcgc
actctagaatttctgcatgacaataaggcacggatagaggccttcagggttcagaagtga
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