Sediminispirochaeta smaragdinae: Spirs_3983
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Entry
Spirs_3983 CDS
T01287
Name
(GenBank) lysine 2,3-aminomutase YodO family protein
KO
K01843
lysine 2,3-aminomutase [EC:
5.4.3.2
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00310
Lysine degradation
ssm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Spirs_3983
Enzymes [BR:
ssm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.2 lysine 2,3-aminomutase
Spirs_3983
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAM_C
Radical_SAM
Fer4_12
Radical_SAM_2
DUF3996
Motif
Other DBs
NCBI-ProteinID:
ADK83068
UniProt:
E1R999
LinkDB
All DBs
Position
complement(4304940..4306250)
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AA seq
436 aa
AA seq
DB search
MIKFPKKQSDLAEKIDNGAGFTKWRDWRWQLKHSIRSISSFETLTGIQFDKDKRQELEAT
VAQFPLSITPYYLSLIEKDDYQNDPIFLQSFADPRELVVQKWEREDPLHEDKDSPVEGLT
HRYPDRVLFHVSNICSMYCRHCTRKRKVGDVDSIPNKNQIRKGIDYIRNTPSVRDVLLSG
GDPLMLDDDYLDWILTELRRIEHVEIVRIGSRMPVVLPYRVTDDLVLMLKKHHPVWLNTH
FNHPRELTHASRTALAKLADAGIPLGNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLY
QCDLSEGLTHFRTPVGKGIEILESLIGHTSGFSVPTYVIDAPGGGGKIPIMPNYLLSWSP
NKVVLRNYEGVITTYREPEQYHNPGCDGTCEECTLQLKFADAEERNAIGIEKLLSEWDET
YSLTPEDNERIGRRNE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattccccaagaaacagagcgatctagctgaaaaaatagataatggagccggt
tttaccaaatggagagattggcgatggcagttgaaacattcaatacgaagtatatcaagc
tttgagacccttaccggaatacaatttgataaagataagcggcaagaactcgaggcaacg
gtagcccaatttcccctttctattactccctattacctcagcctgattgagaaggatgat
taccaaaacgatcccattttccttcaatcctttgccgatcccagggagttggtggtccag
aagtgggaacgggaagatcctcttcatgaagataaggatagtcctgtggaggggctaacc
caccgttatccagatcgggttcttttccatgtcagcaatatatgttccatgtattgccgc
cactgtaccagaaagcgaaaagtaggtgatgtcgattccattccaaataaaaatcagatc
aggaagggtattgattatattcgaaatactccatcggtccgtgatgtcctgctttccggc
ggcgatcctcttatgcttgacgacgactatctcgattggattctgactgaactacgcagg
atcgagcatgttgaaattgttagaattgggagccgcatgcctgtggtcttaccctatcgt
gtcaccgatgatctggttttgatgctcaagaagcatcatccggtctggcttaacacccat
ttcaatcatcctagagagctgacacatgcaagtaggaccgccctcgcaaagcttgccgat
gcagggattcctctgggaaaccaatcggtactgcttgccggggtgaacgattgccccaga
ctcatgaaaacccttgtgcagaagctggtttattccagagtcagaccctactatctgtat
cagtgcgatctctccgaagggcttacccactttcggaccccggtgggaaaggggattgaa
attctcgaaagtctgatcggacatacctccggtttttccgttcccacctatgtgatcgat
gccccgggaggcgggggaaagatcccgatcatgccgaactatcttttgagctggtccccc
aacaaggtcgtgcttcgtaactatgagggtgttattactacctatcgtgagcccgagcaa
tatcacaacccaggctgtgacggtacgtgtgaagagtgcacccttcaattgaaatttgcc
gatgccgaagagcgaaacgccatcggtatcgaaaagcttctctctgaatgggacgaaacc
tattcccttacccctgaagataatgaaaggatcggtcgacgcaatgaatga
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