KEGG   Sediminispirochaeta smaragdinae: Spirs_4119
Entry
Spirs_4119        CDS       T01287                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ssm  Sediminispirochaeta smaragdinae
Pathway
ssm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Spirs_4119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssm03400]
    Spirs_4119
Enzymes [BR:ssm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Spirs_4119
DNA repair and recombination proteins [BR:ssm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Spirs_4119
 Prokaryotic type
     Spirs_4119
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH DUF2400
Other DBs
NCBI-ProteinID: ADK83199
UniProt: E1R9N0
LinkDB
Position
4450170..4450844
AA seq 224 aa
MNTAEHLSIERYGGWNLLIENIRKATGRAPVPSVTAVADEVRDPYRVLVSTIISLRTKDA
VTLESSRRLFQEAPDLGSLAAMDTEQIAKLIYPAGFYRVKAAQLKTIAMKLKETGVPAER
DRLLALPGVGRKTANLVLGLAFGIPAICVDVHVHRISNRLGLITTTTPEKSEMALEAILP
RRYWIEINTLFVAFGQTLCKPVSPLCSRCPLADVCPQNGVERSR
NT seq 675 nt   +upstreamnt  +downstreamnt
atgaacacggctgaacatctttccatcgagcgttacggagggtggaatctcctcattgag
aacattcgcaaggccacgggacgtgcaccggtcccctcggttacggcggttgccgacgag
gtaagggacccctaccgtgttcttgttagtaccattatcagtctgcgtacaaaagatgcg
gtaacccttgagtcttccaggcggctcttccaagaagcaccggacctcggatccctggca
gccatggatacagaacagatagcaaagctgatttatcccgctggtttttaccgggtaaag
gccgcacagttgaagacgattgcgatgaaactgaaagaaacgggggttccggcagagcgc
gaccgcttacttgcacttcccggggtcggcagaaaaacggccaaccttgtccttggcctt
gccttcggtattcctgcaatatgcgtagatgtccatgttcaccgtatttccaacagattg
ggattgattaccaccacaaccccggaaaaaagtgaaatggccctcgaggctatcttgccc
cgccggtactggattgaaatcaacaccctattcgtggcctttggccaaacactttgtaaa
ccggtcagtccgctttgctcgcgctgtcctcttgcagacgtctgtcctcaaaacggggtt
gaacgcagcagataa

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