Shigella sonnei Ss046: SSON_0104
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Entry
SSON_0104 CDS
T00274
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00540
Lipopolysaccharide biosynthesis
ssn01100
Metabolic pathways
Module
ssn_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SSON_0104 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssn01005
]
SSON_0104 (lpxC)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SSON_0104 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
ssn01005
]
Lipid A
SSON_0104 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
DUF6225
Motif
Other DBs
NCBI-ProteinID:
AAZ86899
ShiBASE_China:
SSO0104
UniProt:
Q3Z5R3
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All DBs
Position
115900..116817
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGI
DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP
SAVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacacttaaacgtatcgttcaggcgacgggtgtcggtttacatacc
ggcaagaaagtcactctgacgttacgccctgcgccggccaacaccggggtcatctatcgt
cgcaccgacttgaatccaccggtagatttcccggccgatgccaaatctgtgcgtgatacc
atgctctgtacgtgtctggtcaacgagcatgatgtacggatttcaaccgtagagcacctc
aatgctgctctcgcgggcctgggcatcgataacattgttatcgaagttaacgcgccggaa
atcccgatcatggacggcagcgccgctccgtttgtatacctgctgcttgacgccggtatc
gacgagttgaactgcgccaaaaaatttgttcgcatcaaagagactgttcgtgtcgaagat
ggcgataagtgggctgaatttaagccgtacaatggtttttcgctggatttcaccatcgat
tttaaccatccggctattgattccagcaaccagcgctatgcgatgaacttctccgctgat
gcgtttatgcgccagatcagccgtgcgcgtacgttcggtttcatgcgtgatatcgaatat
ctgcagtcccgtggtttgtgcctgggcggcagcttcgattgtgccatcgttgttgacgat
tatcgcgtactgaacgaagacggcctgcgttttgaagacgaatttgtgcgtcacaaaatg
ctcgatgcgatcggtgacttgttcatgtgtggtcacaatattattggtgcatttaccgct
tataaatccggtcatgcactgaataacaaactgctgcaggctgtcctggcgaaacaggaa
gcctgggaatatgtgaccttccaggacgacgcagaactgccgttggccttcaaagcgcct
tcagctgtactggcataa
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