KEGG   Shigella sonnei Ss046: SSON_2906
Entry
SSON_2906         CDS       T00274                                 
Name
(GenBank) putative cytoplasmic protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
ssn  Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ssn02048]
    SSON_2906
Prokaryotic defense system [BR:ssn02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    SSON_2906
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: AAZ89507
ShiBASE_China: SSO2906
UniProt: Q3YYA5
LinkDB
Position
complement(3044822..3045568)
AA seq 248 aa
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH
YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWM
VAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQY
QDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSK
EEPCTSQE
NT seq 747 nt   +upstreamnt  +downstreamnt
atgagccaatatctgatttttcagcttcatgggccgatggcgtcctggggtgtcgatgct
ccaggtgaagttcgtcatacccatgaacttccttcgcgctcagcattgctggggctactg
gctgccggggtagggattcggcgtgatgataccgaacgcttaaacgcgtttaatcgccac
tattcactggtggtttgcgccagccgtaacccgcgctgggcacgggattatcacacggtc
cagatgccaaaagaggtgcgtaaagcacgttatttcagccgtcgtgaagagttgagcgac
cctgagcttttgagcgcgattatctcccggcgcgactactacaccgatgcctggtggatg
gtggcggtggcaacaacagccgatgcgccttacagcctcgaacagttgcaggacggttta
cgccatccagtttttccgctttatctggggcgaaaaagtcatccgctggcattacctctt
gcgccgttactgctcgaaggcaacgcgtgtgatgccttatgtaatgcataccaacagtat
caggatcatttccataaactgaaagtctcactcccgaaacttcaggatgaatgctggtgg
gaagggaaacacgacggcctggtcgcgagcaaaatattacgccgccgggatgttccttta
aatcgtcagcagtggctgtttggggaacgcaccgtcaatcaggggccgtggctcagcaag
gaggaaccatgtacctctcaagaataa

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