Shigella sonnei Ss046: SSON_3378
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Entry
SSON_3378 CDS
T00274
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00020
Citrate cycle (TCA cycle)
ssn00270
Cysteine and methionine metabolism
ssn00620
Pyruvate metabolism
ssn00630
Glyoxylate and dicarboxylate metabolism
ssn00680
Methane metabolism
ssn00710
Carbon fixation by Calvin cycle
ssn00720
Other carbon fixation pathways
ssn01100
Metabolic pathways
ssn01110
Biosynthesis of secondary metabolites
ssn01120
Microbial metabolism in diverse environments
ssn01200
Carbon metabolism
Module
ssn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssn_M00012
Glyoxylate cycle
ssn_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SSON_3378 (mdh)
00620 Pyruvate metabolism
SSON_3378 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SSON_3378 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SSON_3378 (mdh)
00720 Other carbon fixation pathways
SSON_3378 (mdh)
00680 Methane metabolism
SSON_3378 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SSON_3378 (mdh)
Enzymes [BR:
ssn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SSON_3378 (mdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
AAZ89951
ShiBASE_China:
SSO3378
UniProt:
Q3YX11
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All DBs
Position
complement(3556461..3557399)
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AA seq
312 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV
TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLK
KDIALGEEFVNK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagtcctcggcgctgctggcggtattggccaggcgcttgcactactgtta
aaaacccaactgccttcaggttcagaactctctctgtatgatatcgctccagtgactccc
ggtgtggctgtcgatctgagccatatccctactgctgtgaaaatcaaaggtttttctggt
gaagatgcgactccggcgctggaaggcgcagatgtcgttcttatctctgcaggtgtagcg
cgtaaaccgggtatggatcgttccgacctgtttaacgttaacgccggcatcgtgaaaaac
ctggtacagcaagttgcgaaaacctgcccgaaagcgtgcattggtattatcactaacccg
gttaacaccacagttgcgattgctgctgaagtgctgaaaaaagccggtgtttatgacaaa
aacaaactgttcggcgttaccacgctggacatcattcgttccaacacttttgttgcggaa
ctgaaaggcaaacagccaggcgaagttgaagtgccggttattggcggtcactctggtgtt
accattctgccgctgctgtcacaggttcctggcgttagttttaccgagcaggaagtggct
gatctgaccaaacgcatccagaacgcgggtactgaagtggttgaagcgaaagccggtggc
gggtctgcaaccctgtctatgggccaggcagctgcacgttttggtctgtctctggttcgt
gcactgcagggcgaacaaggcgttgtcgaatgtgcctacgttgaaggcgatggtcagtac
gcccgtttcttctctcaaccgctgctgctgggtaaaaacggcgtggaagagcgtaaatct
atcggtaccctgagcgcatttgaacagaacgcgctggaaggtatgctggatacactcaag
aaagatatcgccttgggcgaagagttcgttaataagtaa
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