Saccharolobus solfataricus P2: SSO0116
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Entry
SSO0116 CDS
T00054
Symbol
ntH-1
Name
(GenBank) DNA endonuclease III, probable (ntH-1)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSO0116 (ntH-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sso03400
]
SSO0116 (ntH-1)
Enzymes [BR:
sso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SSO0116 (ntH-1)
DNA repair and recombination proteins [BR:
sso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SSO0116 (ntH-1)
Prokaryotic type
SSO0116 (ntH-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Ogg-HhH
HHH
HHH_5
DUF2400
Motif
Other DBs
NCBI-ProteinID:
AAK40470
UniProt:
Q7LXY0
LinkDB
All DBs
Position
complement(95139..95849)
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AA seq
236 aa
AA seq
DB search
MKCTAETIFHKLSATYIIKEEDFIAYYVWLKTKDCFKVLVATILSQNSTDKSAIKAYLEL
ERKVGVTPEKLSNANLADIESALKISGLYRTKAKRLKEISRIILERYNGLIDSLLNTSNA
RDELLKLEGIGEKTADVVLLTCYGYYGYKVFPVDTHITRVSKRLGIVPTNAKYSLISSTL
KELFSAYDLLHLHHMLIAHGRQTCKARKPLCNSCIIKECCEYYSHRDGEAWRSNTS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcactgctgaaacgattttccataaactttctgctacctatattataaaagag
gaggattttattgcgtattatgtctggcttaagaccaaagattgttttaaagtacttgta
gcaactattttatctcaaaattctacagataaatcagccattaaagcctatctagagtta
gaaagaaaagttggtgttactccagagaaattatctaacgccaatttggctgacatagaa
agcgcgttaaagatttccggtctttatagaactaaggctaaaagattaaaggaaatttca
aggataattcttgagaggtataatggattaatagatagtttgttaaatactagcaatgcg
agagatgaattattaaaacttgagggaattggagagaagactgcggatgtagtgctattg
acttgttatggatattatggatataaggtctttccggttgatacgcacataactagagtc
agcaaaaggttagggatagtccccactaacgctaaatatagtttaatttcatctacttta
aaagaacttttttcagcctatgatctcctccatcttcatcacatgttaattgcacatggt
agacaaacttgtaaggctaggaaacctttatgtaattcttgtataattaaagaatgttgt
gagtactattcgcatagagatggagaagcttggagatctaatacctcatga
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