Solea solea (common sole): 131443728
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Entry
131443728 CDS
T10853
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
ssoe Solea solea (common sole)
Brite
Membrane trafficking [BR:
ssoe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131443728 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131443728
NCBI-ProteinID:
XP_058469610
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Position
17:complement(13275390..13338159)
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AA seq
2083 aa
AA seq
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MMALMVHLKAVDHLRGKGDRIAKVSFRGLSFYSRVVENCEEVANFNETFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFSMVLQKVAEEGHLELTDTLIDDNNFLIKTSVTIEIRYQ
PVDRTAGVWSDGELLDVPDDRDGFFTFESDSLLSGHSHGSGSSPGRTLQGSIPTFRKAGK
GVFSAMKLGKIKSSRDDHKRGDEPAVLDMDDLDRKAIRLAGTLEPDTISLASVTAVTTNV
SNKRSKPDIKMEPSSGRPVDYQISITIIEARQLIGLNMDPVVCVEVGDDKKYTSMKESTN
CPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGTFKMDVGTVYSQPEHQFY
HKWAILSDPNDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDDLEGNLLLPEGIPAE
RQWARFYVKIYRAEGLPKMNTSLMANVKKAIIGENRDLVDPYVQVQYAGQKGKTSVQKSS
YEPIWNEQVVFTELFPPLCKRLKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTFG
PAWVNMYGSTRQYTLMDEHQDLNDGLGEGVSFRARLLLSIAVEILDISSPEILCSTDVQV
EMVSNISESATGKMEEFFVFGSFLEATMIDRKIGDKPISFEITIGNYGNQIDGVNKPSSV
RRKKKDAENEEEESELIQNSSEDEAEEDADLVSVSTTPPMKPVITDRNYFHLPYFEKKPC
IYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEVIKTEKAFPERRLRGVLEELSVGC
SRFVTLANKDIGQSGRTKLDRERLKSCMREMDSMGQQAKQIRTQVKKNTVRDKLKLAQNF
LQKLRFLADEPQHSIPDVFVWMMSNHKRIAYARIPSKDILYSMVDEETGKDCSKVKAVFL
KLPGKKGFGPAGWTVQAKLELYLWLGLNKQRKDFLSGLPNGFEEMKSAKAGLSLHTMPPV
SLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLGETLCPTWDQL
LVFDDVELFGEASELRDDPPIIVVEIYDQDTVGKAEFIGRTFAKPTIKMCEEHYGPPRFP
PQLEYYQVYRGNSTAGELLAAFELLQIPFNMEEIRRALIAVHNFAVPQIKIGQGGRADLP
PLEGPTDSEHGPIIAVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGKG
VQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYILVGSHAVTTL
RRFIYSTPDKTSNNWATAAKLMNGYMVLTNGGSQPRSSPSLSSRTPSHPTGDIIVNMDTE
PLVRKMDTVVKLDATSDTVVKVDMTEEESDKKKKKKKKKKGEVEEEEETDERMLDWWSKY
FASIETLKGKLRAQEAAQAEAEEREDLEIAAEAAEPDDLLLKGSKTKEKSKDKKSSKDKK
KGHQAADGTDNEPVKSRVDELVVYNKELESEYGTFEDWLHTFNLYRGKAGDDDEHALDDD
RIVGRFKGSLCMYKLPLSEEITREAGFDPNMGMFQSIPHNDPINVLVRVYVVRATDLHPA
DINGKADPYIVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSVYDWDLV
GTDDLIGETKIDLENRFYSKYRATCGISANYSVHGYNVWRDPMKPSQILAKLCKDGKIDG
PHYGPGGKVKVANRIFLGATELEDENGLKKQTEEHLALTVLNRWEEIPRVGCKLVREHVE
TRPLLNPDKPGIEQGRVEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNTDEVILE
DDDYFTGEKSSDIFVRGFELRVVIWNTDDVILEDDAFMTGEKMSDIYVRGWLKGQQEDKQ
DTDVHYHSLTGEGNFNWRFVFPFDYLMAEEKIVISKKESMFSWDETEYKIPPRLTLQVWD
ADHFSADDFLGAIELDLNRFPRGAKTAKQCSLNMIRNEHELPTISIFKQKRVKGWWPFAA
RDENDDLELTGKVEAELHLVTAEEAEKSPVGLGRNEPDPLEKPNRPDTTFLWFLSPLKAI
RYLVCNRYKWLIIKIVLALLLLIMLGLFLYSMPGYLVKKLLGA
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctaatggttcacctgaaggcggtcgatcaccttcgggggaaaggtgacagg
atcgccaaagtttcattcagaggtttgtccttctacagtcgtgttgtggagaactgtgag
gaagtggctaacttcaacgagacttttcgatggcccattgccagcaggctggatggaaac
gagatgctggagatccaagtgtacaattacagcaaagtcttctccaacagactggtgggg
actttttctatggttcttcagaaggtggcagaagagggacacctagagttgaccgacaca
ctcatagatgataacaactttttaataaagaccagtgtgaccatcgagatcagataccag
ccggtggacaggacagccggcgtgtggagcgatggagagctcctggatgtgcctgacgac
cgtgatggtttttttacctttgaaagtgacagcctgctctctggacacagccacgggtca
gggtcatcccccggtcgaaccttacagggatccataccgaccttcagaaaagcggggaag
ggagttttttcagccatgaagcttggcaagatcaagagctccagagacgaccacaagaga
ggagatgagcctgcagtcctggacatggacgacctggacaggaaggcgatccgtcttgct
ggaactctggagccggacaccatctctctggcctctgtcaccgccgtcactaccaacgtg
tccaataagaggtcaaagccagatatcaagatggaaccgagctctgggcgaccagtggat
taccagatcagcatcacaatcatcgaggctcggcagctcataggcctcaacatggaccct
gtggtgtgtgtggaggttggcgatgacaagaagtacacgtcgatgaaggagtccaccaac
tgcccgtactacaatgagtattttgtctttgacttccacgtcccccccgacgtcatgttt
gacaagatcatcaagctttctgtgattcactcgaaaaatcttctccggagtgggaccttg
gtgggaacttttaagatggatgtcggaactgtttactctcagcccgaacaccagttctac
cacaagtgggccatcctgtcggatccaaatgacatcacggccggatgcaagggatatata
aagtgtgacatcgccgtggttggaaagggtgacaacatcaagactccacacaaggccaac
gagaccgatgaggacgacttagaggggaacctcttgctcccagagggaatccccgcagag
aggcagtgggcgaggttttacgtcaagatctaccgagccgagggacttcccaagatgaac
accagcttaatggcaaatgtgaaaaaggccatcataggagagaacagagacctggtggac
ccgtatgttcaagtgcaatacgccgggcagaaggggaagacttcggttcagaagagcagt
tatgaaccaatctggaacgagcaggtcgtcttcactgagctcttccctccactctgcaaa
cgcctgaaggtccagatccgcgactcggataaggtcaacgacgttgccataggaacccac
tttattgacttgcgcaagatatccaatgatggtgataaagggttcctgcccaccttcggc
ccagcgtgggtcaacatgtatggctccacgcgtcagtacacactgatggacgagcaccag
gacctgaacgacggactcggggaaggcgtgtccttcagagcgcggctcctgctctccatc
gccgtggagatcctcgacatcagctcgcccgagatcctctgctccacggacgttcaggtg
gagatggtttccaacatctcagagagcgccacgggtaaaatggaagagttcttcgtcttc
ggttccttcctggaggccaccatgatcgacaggaagattggtgacaaaccgataagtttt
gaaatcacaataggtaactatggcaaccagatagacggcgtaaacaagccctcgtcggtg
aggaggaagaagaaagacgcggagaacgaagaggaggagagcgagctcatccagaactcc
agcgaggacgaggcggaggaggacgcggacctcgtctccgtgtccaccaccccaccgatg
aagcccgtcatcaccgacaggaattacttccatcttccctactttgaaaagaagccctgc
atctacatcaaaagctggtggcaggaccaaagacgacggctctacaactccaacatgatg
gataagattgctgacaagctggaggagggtttgaacgatgtgcaggaggtcattaagacg
gagaaagccttcccagagcgcaggctcaggggcgtgctggaggagctgagcgttggttgc
agccgctttgtgaccctggctaacaaggacataggccagtcaggcagaaccaaactggat
cgggaacgactcaagtcctgcatgagggaaatggacagcatgggtcagcaggccaagcag
atccggacccaggtgaagaagaacaccgtccgggacaagctcaagctggcgcagaacttc
ctgcagaagctccgcttcctcgcggatgagcctcagcacagtatcccggatgttttcgtg
tggatgatgagcaaccacaagcgcatcgcgtatgcccgcattccctccaaggacatcctg
tactccatggtggatgaagaaactggcaaagactgcagtaaagtcaaagccgtcttcctc
aagctgcccggtaagaagggcttcggtcccgcaggctggaccgttcaggctaagctggag
ctgtatctgtggctgggcctcaataagcaaagaaaggacttcctcagcggtctgccaaat
ggttttgaagaaatgaaatctgctaaagctggcctcagtctccacaccatgcctcctgtc
agccttgtttacaacatgaagcaggtgtttcagctgcgagcacacatgtaccaggcccgc
agcctgtttgccgccgacagcagtggactctcggatcccttcgctcgggtcttcttctcc
acacacagccaggtcactgaggtcctcggcgaaactctgtgtcccacctgggaccagctg
ctggtgtttgacgacgtggagctgttcggagaggccagcgagctgagggacgacccgccg
atcatcgtggtcgagatctacgaccaggacactgtgggcaaggcagagttcatcggtcgg
accttcgcgaagcccaccatcaagatgtgtgaggagcactacggccccccgaggttcccg
ccgcagctggagtactaccaggtttacagaggcaacagcaccgctggggaactgctggcc
gccttcgagctgctgcagattcctttcaatatggaggagataaggcgagctctcatcgcc
gtccataactttgctgtacctcaaatcaagattggtcaaggaggcagagctgaccttcct
ccccttgaggggccgacagactctgagcacgggcccattatcgctgtgccgttgggcatc
cggcctgtcctgagccgctaccgcattgaggttttgttctgggggttacgagacctgaag
aggattaacttggcgcaggtggatcggccccgcgtggacatagaatgtgcaggtaaaggc
gtccaatctgctctcatccaaaactacaagaaaaacccaaacttcagcaccctggtcaag
tggtttgaagtggacctgccagaaaatgagctcctgcaccctcctctcaacatccgggtg
gtggactgccgggcatttggccgctacatcctggtggggtcacacgccgtcaccaccctg
agacgtttcatctacagcaccccagataaaacatccaacaactgggccactgcagctaag
ctaatgaacggctacatggtccttacaaatggcggctcccagcctcgctcctcacccagc
ctttcctcccgcaccccctctcaccccacaggtgacatcatagtgaacatggacacggag
cctctggttcgcaagatggacacagtcgtcaagttagatgccacgtccgacaccgtcgtc
aaagttgacatgactgaggaggagagtgacaagaagaagaaaaagaagaagaagaagaaa
ggagaagtcgaggaagaggaagagacagacgagcgaatgctcgactggtggtccaaatat
ttcgcctccatagagacactgaaggggaaactcagagcccaggaggcagctcaggccgag
gcagaggagagagaggacctggagatagcagcagaggcagcagaacctgatgaccttctt
ctgaaaggctccaagacaaaagaaaagagcaaagacaagaagagctccaaggacaagaag
aaaggtcatcaggctgcggacggaaccgacaatgaacctgtcaaatcgagagtggacgag
ctggtggtttacaacaaggagctggagagtgagtacggcacctttgaggactggcttcat
acgttcaacctgtacagagggaaagctggagatgacgatgaacacgctctggatgatgac
aggattgttggcagattcaagggatccctgtgtatgtacaagcttcctttgtctgaggag
atcacgagagaggcggggttcgatcccaatatgggcatgttccaaagcatcccacataac
gatccgatcaacgtcctcgtccgcgtctacgtcgtcagggctacagatcttcatcccgct
gatatcaacgggaaggccgatccgtacattgtcatcaagctgggcaagtcagaggtcaaa
gacaaagagaattacatctccaaacagctcaatcctgtgtttggcaaatcattcgacatc
gaggccactttccccatggagtccatgctgacggtgtccgtgtacgactgggacttggtc
ggaaccgacgacctgatcggagagacaaagattgacctggagaatcgtttctacagcaaa
tacagagccacgtgtggcatttccgccaactattcagtccatggatataatgtatggcga
gaccctatgaagcccagccagatcttggctaagctctgtaaggacggcaagattgatgga
cctcattacgggcctggaggcaaagtcaaggtggcaaatcgaatcttcctgggagcgacg
gagttagaggatgagaatggtttgaagaagcagacagaagagcatttggctctgacggtg
ctcaaccgctgggaggaaatcccccgagtcggctgcaagctcgtccgcgagcacgtggag
accagacccctgctgaacccggacaagcccggcatcgaacagggccgtgttgagatgtgg
gttgatatgtttcccatggacatgcctgcacctggacctgcgattgacatatcaccgcgg
aaaccaaagagatatgagctcagggtgattatttggaatacagacgaagtaatactggag
gacgatgattacttcactggggaaaagtccagtgacatatttgtcaggggctttgagctt
cgtgttgttatttggaacactgatgacgtaattctagaggacgatgctttcatgacagga
gagaagatgtctgacatctatgtcagggggtggctgaaagggcagcaggaggacaagcag
gacacggacgtgcactatcactccctcactggtgagggcaactttaactggcgctttgtc
ttccccttcgattaccttatggctgaggagaagattgtcatctccaagaaagagtccatg
ttctcatgggacgagaccgaatacaaaatcccccctcgcctcacgctgcaggtgtgggac
gctgatcacttctccgctgatgacttcctaggcgcaatcgagctggacctgaaccgcttc
ccccgtggtgccaagacggccaagcagtgctccctcaacatgatccggaacgagcatgag
ctgcccaccatttccatattcaaacagaagagagtgaagggctggtggccatttgctgcc
cgggacgagaacgacgacttggagctcacgggtaaagttgaagccgagcttcacttggtg
acagcggaggaagcagagaaaagtcctgttggactggggcgaaatgagccggatccactg
gagaaacccaatcgcccagacaccaccttcctgtggttcctgagtccgctgaaagccatc
cgctacctggtgtgcaaccgctacaagtggctgatcatcaagatcgtgctggccctgctg
ctgctcatcatgctgggcctcttcctctacagcatgcccggctaccttgtcaagaaactg
ctgggggcctga
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