Solea solea (common sole): 131444594
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Entry
131444594 CDS
T10853
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
ssoe Solea solea (common sole)
Brite
Membrane trafficking [BR:
ssoe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131444594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131444594
NCBI-ProteinID:
XP_058471071
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Position
18:complement(18258897..18280901)
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AA seq
1790 aa
AA seq
DB search
MKRSKHRGHKEDKNGDEPAILETENMGMFMGGGQDLDTISVASVTAVTTNVSNKRSKPDI
KMEPSSGRPVDYQVSVTVIEARQLVGQNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYFV
FDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYSQPEHQFYHKWALLSDP
DDITGGCKGYVKCDVAVVAKGDTIKTPHKANESDEDDVEGNLLIPEGVPAERQWARYYLK
IYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQI
VFTEMFPPLCKRMKIQIRDSDKVNDVAMGTHFLDLKKISNDGDKGFLPTLGPAWVNMYGS
TRTYSLMDEYQELNDGLGEGVSFRARLLVSLGVEILDPSSPDCSSSTEVQVEGVPNISET
ATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEVDGVVQPKRKGKKGDGDEE
ETELIHNSSDEEMEDDGDLTSVATTPLMKPVVTDRNYFHLPYFERKPCFYIKSWWQDQRR
RLFNANIIDNTADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSHGCSQYLSLANKDQN
QSGRTKLDRERLKLCMSEVESIGQQAKAMRTQVKKSTVRDKLKLAQNFLSKLRFLADEPQ
HSVPDVFIWMISNGKRIAYARVPSKDILYSSTDEERGKDCGKVKTMFLRIPGKKGFGPAG
WTVQSKIEIYFWLGLTRQRKDYLNGLPNGFEENKLSKGPGLPCTPPISLTYMMKQIFQLR
VHMYQARSLFAADSTGLSDPFVRVFFSTQSQVTEVLPETLCPTWDQLLVFENVELFGEAN
ELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGNC
AAGEMLAAFELLQIGPNGKADLPPIDGPTDMERGPIMPVPLGIRPVLSKYRIEVLFWGLR
DLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPPLN
IRVVDCRAFGRYTLVGSNAVTSLRKFIYRPSDKQANNWSSNNTEEIIVVNMEPEPSYKKM
DTVVKLDCGSDAVVKVEDDDKDGKGKKKKRKKGDEPEDEEFDESMFDWWSKYFASIETLT
EALKAQEAALSDSEDKDDMDITDSGDIKPDDSPVKGSKRGRGKKDKKKMTIDPFERKKPK
LDELKVYPKELEGEFDNFEDWLHSFNLFRGKGGDDDDQNVTDEDRIVGRFKGSMCMYKVS
DDLPRDFDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIRLGKTEIK
DKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRFYSK
HRATCGITRNYAIHGYNVWRDPMKPTHILAKLCKDGKVEAPQYGPGGRVKVENRVFMAPT
EIEDENGLKKQTDEHLALTVLKHWEDIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIEMW
VDMFPKDMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLK
GQQEDKQDTDVHYHSITGEGNFNWRFVFPFDYLMAEEKIVISKKESMFAWDETEYKIPAR
LNLQVWDADHFSADDFLGAIELDLNRFPRGAKTPKQCTIDMVTNEGDMPMVSIFKQKRIK
GWWPFVARNEDEEFELTGKVEAELHLLTGEEAEKNPVGEGRNEPEPLEKPNRPDTSLLWF
LTPLKAIKHLLCTQYKWLTIKIVTALLLLALLALFLYNMPGYMVKKMLGA
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgcggacacaaggaggacaaaaatggagatgagccggccatt
ttggagacagaaaacatgggcatgttcatgggaggaggccaagacctggacaccatctca
gtggcctcagtcaccgccgtcaccaccaatgtatcaaataagaggtcaaagccagacatc
aagatggagcccagttcaggaagaccagtcgattaccaagtcagtgtgacagtgattgag
gccagacagctggtgggacagaacatggatccgatggtctgcgtggagattggagaagat
aagaagtacacctcgatgaaagaatcgaccaactgcccgtattacaatgaatattttgtg
ttcgacttccacgtccctccagatgttatgtttgacaaaatcctgaagttgtctgtaatc
cactctaaaaacctcctgcgtagtggaacactggttggaacctttaaactggatgttggc
acaatctactcacagccagaacatcagttttaccacaaatgggcgctgttgtctgacccc
gacgacatcacaggaggttgtaaaggatatgtgaagtgtgatgttgcagttgtggccaaa
ggagacacaataaagactccacacaaggccaatgagtctgatgaagatgacgtagagggg
aatctcttaatacctgaaggggtgccggcagagcgacagtgggctcgctattacctgaag
atctacagagcagagggactcccaagaatgaacaccagcatcatggccaatgtgaaaaag
gccttcataggagaaaataaggacctggttgatccttatgttcaagtactgtttgctggg
cagaaggggaaaacatcggttcagaagagctgctacgagcccatctggaatgagcaaata
gttttcaccgagatgtttcctccgctgtgcaaacgcatgaagatccagatccgtgactcg
gataaagtgaatgacgttgctatgggaacacacttccttgacctaaagaagatttccaat
gatggggacaaaggcttccttccaactctgggccctgcctgggtgaacatgtacggctcc
actcggacctactccctgatggacgagtaccaggagttgaatgacggactcggcgagggc
gtgtccttcagagctcgtctgctcgtcagcctgggcgttgagatcctggacccctcctct
cccgactgttccagctccaccgaggtgcaggtggagggagtgcccaacatctcagagacc
gcaaccgggaaagttgaggaatttttcctcttcggttcgttcctcgaggctacaatgatt
gatcggaagatcggcgataaacccatcaactttgaggtcaccataggttactatggaaac
gaagtcgatggagtggtccagccaaagaggaaagggaaaaagggcgatggcgatgaggag
gaaacggagctgatacacaactcgagtgacgaggagatggaggacgacggggacctgaca
tcagtggctactacacctctcatgaaacctgtcgtcactgatcgaaactacttccacttg
ccctattttgagaggaagccttgtttctacatcaagagctggtggcaggatcagagacgg
aggctgttcaatgccaacatcatagacaacactgcagataaactggaggatggactaaac
gacgtgcaggaaatcattaagacagagaaggcctatcctgagcgcagactcagaggcgtc
ctggaggaactcagccatggatgcagtcagtatctttcgctggcaaacaaggaccagaat
cagtccggtagaaccaaacttgacagggagagactgaagctgtgcatgtcagaagtggaa
tccatcggccagcaagcgaaggccatgaggacacaagtgaagaaaagtacagttagagat
aaactcaaactggcccagaacttcctgtcaaagctgcgcttcctggctgatgaaccgcaa
cacagcgttccggatgttttcatatggatgataagtaacgggaagcgcattgcttatgca
cgtgtcccctccaaagacattctatattccagtacagacgaggagaggggaaaggactgt
ggcaaagtcaaaactatgttcctcaggattcctggaaagaaaggctttgggcctgcgggc
tggacagtccagtccaagatagagatttacttttggctcggtctaaccaggcagcgcaaa
gactacctgaatggccttccaaatggatttgaggaaaacaagttgtccaaaggacccggc
ctgccgtgcacgcctcccattagcctcacttacatgatgaaacaaatcttccagctgagg
gtccacatgtaccaagcccgcagcctgtttgctgctgacagcactggcctgtctgatcca
tttgtcagagttttcttctcaacacagagtcaagtcactgaggtgttgcctgagaccctc
tgccccacatgggaccagctgctggtctttgagaatgtggagttgttcggcgaggccaac
gaactgagagacgaccctccaatcattgtcattgagatctatgatcaggacacagtgggc
aaagccgacttcatgggcagaacctttgctaagcctgtggtcaagatggcagacgaacac
tacggccctccacgcttccctccacagctggagtactatcagatctaccgcgggaactgc
gccgctggagaaatgctggcagcgtttgaactgctgcagattggacccaatgggaaagcc
gacctgcctccgatagacgggcctacagatatggaacgtggtccaatcatgcccgtgcca
ctgggaatccgaccggtgctcagcaagtacaggattgaggttttgttctggggcttgaga
gacttgaagagagtgaatctggcccaggtggatcggcctcgtgtggacattgaatgtgct
gggaagggggttcagtcagccctcatccccaactacaagaaaaaccccaacttcagcacc
ctcgtcaagtggtttgaagtggatttgcccgagaatgagttgcttcacccaccgctgaac
atccgcgtggtggactgcagggcttttggccgctacactctggtcggctccaacgccgtc
acaagcctccggaagttcatctacaggccgtcagacaagcaggccaacaactggtcctca
aacaatactgaggaaattattgttgtgaatatggaacctgagccttcttataagaagatg
gacactgtggtcaaactagactgtggctctgatgctgtggtcaaggttgaggacgacgat
aaggacgggaaggggaaaaagaagaagaggaagaagggcgatgagcctgaggatgaggaa
ttcgacgagagcatgtttgactggtggtccaaatactttgcctccattgaaactttgaca
gaggcactcaaagctcaagaggcagctctgtcagactccgaggacaaagatgacatggac
atcacagacagtggagacatcaaacctgatgactctcctgtgaaaggctccaagcgagga
agaggaaagaaggacaagaagaagatgacaatcgacccgtttgagaggaaaaagccaaag
ctggacgagctgaaggtttatcctaaggagctagagggcgaattcgacaactttgaggac
tggcttcacagtttcaacctgttcaggggaaagggaggcgatgacgacgaccagaatgtg
acggacgaagaccggattgttggaagattcaaaggctcaatgtgcatgtacaaagtgtca
gatgatcttcccagagactttgattccaacatgggaatgtttcagaacattcctcacaat
gatcccatcaatatccttgtccgcatctatgtcatcagggcgactgatctgcacccggct
gatattaacggaaaagccgacccgtacatcgcaattagactgggaaagacagagatcaag
gataaagagaactatatctcaaaacagctgaaccctttgtttggaaagtcttttgacgtg
gaggccacattcccaatggattccacgctcaccgtgtcaatctacgactgggacctggtg
ggaaccgacgatctgatcggagaaaccaaactggaccttgagaatcgcttctacagcaaa
cacagagccacgtgtggtatcacacgtaactacgccatccatggttacaatgtttggaga
gacccaatgaaacccacacacatcctggcgaagctgtgtaaggacggcaaagtggaggcg
ccccagtacggcccaggtggaagagtgaaggtggagaaccgtgtcttcatggctccgact
gagatcgaggacgaaaatggtttgaagaagcagacggatgaacacttggctttgaccgtg
ttgaagcactgggaggacatcccgcgggtcggatgcaaactggtaccagaacacgtggaa
acgcgaccgctgctgcacccggacaaacctgggattgaacaaggaagaattgagatgtgg
gtggacatgtttcccaaagacatgactgcgcctggtcccgcactcgatatttcaccgagg
aaaccaaagaagtttgaactgagggtgatcatctggaacacggatgaagtcgtgctggag
gacgacgacatctttaccggcgagaaatcgagtgatatctttgtgcgaggttggttgaaa
gggcagcaggaggacaagcaggacactgacgtccactaccactccatcaccggggagggc
aacttcaactggcgcttcgtcttccccttcgactacctcatggccgaggagaagatcgtc
atctccaaaaaggagtccatgtttgcctgggacgagacggaatacaagatcccggctcgt
ctgaatctgcaagtgtgggacgccgaccatttctctgcagacgacttcttaggtgctatt
gagctggacctgaaccgcttcccacgcggcgcaaagactccgaagcagtgcaccattgac
atggtgacaaacgaaggagacatgcccatggtctccatcttcaaacagaagcggatcaaa
ggctggtggccattcgtggcccgaaatgaagatgaagagtttgaactgacaggcaaagtg
gaagcagagctgcaccttctgaccggagaggaagctgagaaaaaccctgtcggcgaagga
cgcaacgaaccggagccgctggagaaacccaaccgccccgacaccagccttctgtggttc
ctcacgcccctcaaagccattaaacacttgctctgcacccagtacaagtggctgaccatc
aagatcgtgaccgcgctcctgctgctggccttgctggctcttttcctctacaacatgccg
ggttacatggtcaagaaaatgctgggagcttga
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integrated database retrieval system