KEGG   Solea solea (common sole): 131455859
Entry
131455859         CDS       T10853                                 
Name
(RefSeq) mamu class II histocompatibility antigen, DR alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe04145  Phagosome
ssoe04514  Cell adhesion molecules
ssoe04672  Intestinal immune network for IgA production
ssoe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    131455859
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    131455859
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    131455859
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    131455859
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssoe04147]
    131455859
Exosome [BR:ssoe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   131455859
  Exosomal proteins of epithelial cells
   131455859
  Exosomal proteins of breast milk
   131455859
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_3 C2-set_2 Ig_2 I-set ig ICAM1_3_5_D2
Other DBs
NCBI-GeneID: 131455859
NCBI-ProteinID: XP_058479685
LinkDB
Position
3:4502268..4522881
AA seq 241 aa
MMMMIMMKLSLLVLSFVLSVSAEGFHDDLYIAGCSDTDGEFMYTLDGEEKWYADFINRRG
VEPQPSFVDHMSYVEGAYESAVANQQICRSNLKNGRLGMKEIPVEKDPPSSPMIYSRDAV
EVGEKNTLICHVTGFYPAPVKVYWTKNNQNVTTGVSINIPHPNDDGSFRQTSRLEFIPQP
GDIYSCSVEHPALREPLTRTWDVEVKQPSVGPAVFCGVGLTLGLLGVAAGTFFLIKGNEC
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgatgatgatgatcatgatgaagctgtccctcctcgtcctctcttttgtcctcagtgtc
tctgctgaaggttttcacgatgacctttatatcgctggttgttcagacactgatggagag
ttcatgtacacactggatggtgaagagaaatggtacgctgacttcatcaacaggagagga
gttgagcctcagcccagttttgttgatcacatgagctatgtggaaggagcctatgaatct
gctgtggcaaatcaacagatctgcagatcaaacctgaagaacggtcgtctcggtatgaag
gaaatcccagtggaaaaagatccaccttctagtccaatgatctacagcagagacgcggtg
gaggttggagagaaaaacactctgatctgtcatgtgactggtttttaccctgctcctgtc
aaagtctactggaccaaaaacaaccagaatgtcaccacaggagtgagtatcaacattccc
catcccaacgacgacggttccttcagacaaacctccagactggagttcatcccacaacca
ggagacatctacagctgttcagtggaacatccagctctgagagaaccactgaccagaacc
tgggatgtggaggtgaagcagcccagtgtgggtccagcagtgttttgtggtgtgggtctg
actctcggtcttctcggtgtggcggctggaaccttcttcctcatcaaaggaaatgagtgc
agatga

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